Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0873 ATGTTGTGGATTCTGACCTCTTTAACCTTGAATGAAAAGGCAGAAATGCAGGGAAGCTTGCGAAAGGGCGCTGCTACTAAAGTCGAAGGTGGAAAAGCCTCTGCTGTGGACTCCGAATTTCAGATTCATGAGCTGAAAAAGAAGCTTAGACATGAAGAGAACATCCACAGAGCATTGGAGAGGGCTTTTAACAGACCTTTGGGAGCTCTGCCTCGTCTTCCTCCATATCTCCCCTCCTGCATACTAGCGCTTCTGGCTGAAGTAGCAGTTCTGGAAGAGGAAATTGTTAGGCTTGAAGAGCAGGTAGTACAATCCAGGCAGGACTTGTACCAGGAAGCTATCTACTTGTCATCTTCTAAGAGAAGAATGGAGGGTTCGGCTAATGTAAACAATGCTAATTCAGTTGAAAGCCCAAGACAGGTCAAATTGAAGTCTTCTTCCCGTACAATGAATAGCCCGGCAAAATCTAAAACTAGGCTTGCGACAACATTACCAGAGGATCGTGAAGGAAAGGAGAATGAGTCCTGCACTAATTCTTTTAAGAAAAGCAAGCATTTTTCGTGTAAAAACCAAACAACTAAAATTCCAATCAAGAAACTTTCGACTGACAATAAATCAGGGCAGAAGTGTTGGGATCCTCATAAGAGACAGCAAGAATTAAGGGGGAAAAGCAAATCAACTGCAGAAGTAGGGAATCCTAGTCCACATGAAAAAGCACTGGGAGACGACAGCCCTAATATTATTTCAGAAAATATTTTGAAGTGCTTATCAACCATCCTCATGAGAATGAGTTCAGTGAAGAATCCAGGTCCTGCAGGTGACATTGAAGGATGGGATCCATATGGTACCTGTTTGGGATTTGGGAAGCAGGATATTGGTCCATATAATCAACCATGCGCAATTGAAGCCAGATCTTTCAATCCAAAACGAACTTCAAATTCTTTGATTTTGTTGGGTAGATTAAAAATTCTTTTGAGGAAACTTGCCTCTGTCAAGTTAGAGAACCTCAACCACCAGGAGAAACTTGCATTCTGGATCAACATCTATAATTCCTGCATAATGAACGCCTTCATAGAGAATGGCATTCCTGAGAGTCCTGAACTGGTTGTTTCACTGATGCGGAAGGCAACAATAAATGTGGGTGGACACTTGCTAAGTGCAAACACTATCGCACGTTTCATCTTAAGACTTCCTTACCACTGGAAATGTACGTTTCTGAAGGGAGCAAAGAATCATGAAATGACGGCAAGAAACATATTTGGACTGGAATTGTCAGAATCTCTAGTGACATTTGCACTCTCCTGTGGAACTTGGTCCTCTCCTGCTGTGAGGATTTATACGGCGTCACAGGTTGAGAATCAGCTGGAAGTTGCAAAAAGGGAGTACTTGCAGGCTGCAATTTGTATTTCAACGACCAAGATTGCTATCCCAAAACTACTTGATTGGTATTTACTGGATTTTGCAAAAGACTTGGAATCATTGCTGGATTGGATTTGCCTGCAATTACCAAGTGAACTTGGGAAAGAAGCCATCAAGTTCATTGAGAAAAGAAAAACCCAGCCCCTCTCACAATTTGTACAAATTATACCATATGACTTCACTTTTAGATACCTTCTATATACATGA 1626 0.417 MLWILTSLTLNEKAEMQGSLRKGAATKVEGGKASAVDSEFQIHELKKKLRHEENIHRALERAFNRPLGALPRLPPYLPSCILALLAEVAVLEEEIVRLEEQVVQSRQDLYQEAIYLSSSKRRMEGSANVNNANSVESPRQVKLKSSSRTMNSPAKSKTRLATTLPEDREGKENESCTNSFKKSKHFSCKNQTTKIPIKKLSTDNKSGQKCWDPHKRQQELRGKSKSTAEVGNPSPHEKALGDDSPNIISENILKCLSTILMRMSSVKNPGPAGDIEGWDPYGTCLGFGKQDIGPYNQPCAIEARSFNPKRTSNSLILLGRLKILLRKLASVKLENLNHQEKLAFWINIYNSCIMNAFIENGIPESPELVVSLMRKATINVGGHLLSANTIARFILRLPYHWKCTFLKGAKNHEMTARNIFGLELSESLVTFALSCGTWSSPAVRIYTASQVENQLEVAKREYLQAAICISTTKIAIPKLLDWYLLDFAKDLESLLDWICLQLPSELGKEAIKFIEKRKTQPLSQFVQIIPYDFTFRYLLYT 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0873 541 MobiDBLite consensus disorder prediction 121 183 - -
Lele03g0873 541 Coils Coil 42 62 - -
Lele03g0873 541 Coils Coil 81 108 - -
Lele03g0873 541 Pfam Leucine-zipper of ternary complex factor MIP1 42 112 IPR025757 -
Lele03g0873 541 MobiDBLite consensus disorder prediction 208 223 - -
Lele03g0873 541 Pfam Protein of unknown function, DUF547 334 463 IPR006869 -
Lele03g0873 541 MobiDBLite consensus disorder prediction 121 159 - -
Lele03g0873 541 MobiDBLite consensus disorder prediction 197 245 - -
Lele03g0873 541 PANTHER EXPRESSED PROTEIN 31 539 - -
Lele03g0873 541 MobiDBLite consensus disorder prediction 161 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0873 Lele-ChrLele03 5081525 5084711 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0198 25 1160145 1163074 Lele03g0873 03 5081525 5084711 CCT
Lele27g1889 27 23568000 23570932 Lele03g0873 03 5081525 5084711 CCT
Lele03g0873 03 5081525 5084711 Lele03g0873 03 5081525 5084711 ECH
Lele02g0859 02 5210313 5217114 Lele03g0873 03 5081525 5084711 hybridization