Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0860 ATGTCAACCAAGAGTGAACACCATACGGTCCCCCTTTCGGTACTCCTGAAGCGTGAATCAGCAAGCGAGAAAATTGAAAAACCAGAAATTCAGCATGGTCAAGCAAGCCAGAGCAAAAAGGGAGAGGACTTCACGCTACTAAAAACGGAATGCCAGAGGGTGGTGGGGGACGGGGTGTCGACATATTCTGTTTTTGCACTATTTGATGGACACAAAGGATCTGCTGCTGCTATTTACGCCAAGGAGAATCTCCTAAATAATATTTTAAGTGTGATTCCTTCGGATCTTAACAGAGATGAGTGGATAGCAGCTTTGCCTCGGGCTTTAGTTGCAGGCTTTGTAAAAACTGATAAAGATTTTCAAGAGACAGCGCAAACATCAGGAACAACTGTGACCTTTGTGATTATAGAAGGATGGGTTGTCACCGTTGCATCTGTCGGTGATTCCCGATGCATACTTGAACCTTCTGAAGGTGGGCTTTATTACTTATCAGCGGATCACAGGCTAGACACCAATGAAGAGGAGGTGACACGTATATCGAGTAGTGGGGGTGAGGTTGGTCGGCTAAATACTGGTGGAGGTGCAGAGATTGGTCCTTTGAGATGTTGGCCTGGTGGCTTGTGTCTTTCAAGATCTATTGGCGATTTGGATGTTGGACAATTCATTGTTCCTGTACCTTACGTCAAGCAAGTGAAGCTGTCAACATCTGGAGGCAGACTTATCATCTGCAGTGATGGTGTTTGGGATGCTCTATCTGCAGAAACAGCCCTTGATTGTTGTCGTGGGATGTCACCAGAGGTTGCAGCCCCGCGTATCGTTAAAGAAGCTGTACAAGCAAAGGGACTTAGAGATGATACAACCTGCATTGTTATTGATATTTTGCCCCCAGAGAAACCACCTGCTCCTCCTCTGACACATGCTAAAAGACCAATAAAAGTAATGTTTAGATCCATGTTTTGGAGAAAGTCTGCAGAATCATCTTCTTATAACGAAAAAGATTATATGGAGCCTGATGTGGTAATGGAACTGTACGAGGAAGGATCTGCTATGCTTTCAGAGAGGTTAGATACAAAATATCCACTCTGCAACATGTTCAGGTTGTTTACATGTGCAGTCTGTCAAGTTGAGATGAAGCCTGGGGAGGGTATATCAATACACGAAGGGGCATCCAACCCGGCGAAATTGCATCCCTGGGATGGTCCATTCCTTTGCCGAAGTTGCCAAGACAAAAAAGAAGCCATGGAAGGGAAAAGAAAAATTAGAGTCAGAAGATTCTCAATTGCATGTTATACGATTTCTGACTTGGAGGAGTGGAATAGCAACCGCCCAAGTGTTGTGGAAGGCTGTGCTAACTGCAGTGTACAATACTACAATAGGATGTTGGACGCAATTTATTCTTTTTCTATAATTATTCTGCGCCGAATACGTTCAATTGTACATGGGTCCTTTGGAATCACGATGTGGACCTTGAAAGAAAGGGCTTTTGTTCCCATGTCGAATTTAATGAAGTTGACCTCAAGAAGACAGGATCAGTTGGGTGGTGCCGGCCGGCGACGGCGTCACAAAAGGAGAACTGTTGAGGAAATTGTATGGCTAACATCAAGAGGATGA 1611 0.4457 MSTKSEHHTVPLSVLLKRESASEKIEKPEIQHGQASQSKKGEDFTLLKTECQRVVGDGVSTYSVFALFDGHKGSAAAIYAKENLLNNILSVIPSDLNRDEWIAALPRALVAGFVKTDKDFQETAQTSGTTVTFVIIEGWVVTVASVGDSRCILEPSEGGLYYLSADHRLDTNEEEVTRISSSGGEVGRLNTGGGAEIGPLRCWPGGLCLSRSIGDLDVGQFIVPVPYVKQVKLSTSGGRLIICSDGVWDALSAETALDCCRGMSPEVAAPRIVKEAVQAKGLRDDTTCIVIDILPPEKPPAPPLTHAKRPIKVMFRSMFWRKSAESSSYNEKDYMEPDVVMELYEEGSAMLSERLDTKYPLCNMFRLFTCAVCQVEMKPGEGISIHEGASNPAKLHPWDGPFLCRSCQDKKEAMEGKRKIRVRRFSIACYTISDLEEWNSNRPSVVEGCANCSVQYYNRMLDAIYSFSIIILRRIRSIVHGSFGITMWTLKERAFVPMSNLMKLTSRRQDQLGGAGRRRRHKRRTVEEIVWLTSRG 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0860 536 CDD PP2Cc 39 293 IPR001932 -
Lele03g0860 536 ProSiteProfiles PPM-type phosphatase domain profile. 24 293 IPR001932 -
Lele03g0860 536 Pfam Protein phosphatase 2C 53 278 IPR001932 -
Lele03g0860 536 Gene3D - 32 298 IPR036457 -
Lele03g0860 536 SMART PP2C_SIG_2 46 293 IPR001932 -
Lele03g0860 536 SMART PP2C_4 21 291 IPR001932 -
Lele03g0860 536 MobiDBLite consensus disorder prediction 1 37 - -
Lele03g0860 536 FunFam probable protein phosphatase 2C 12 32 299 - -
Lele03g0860 536 PANTHER PROTEIN PHOSPHATASE 24 292 - -
Lele03g0860 536 SUPERFAMILY PP2C-like 38 293 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0860 Lele-ChrLele03 5014298 5020054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0860 1 418 PP2C-type Phosphatase Gene Family AT1G47380 79.524 0.0 698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g0896 28 5781445 5782497 Lele03g0860 03 5014298 5020054 CCT
Lele25g0905 25 5785238 5789031 Lele03g0860 03 5014298 5020054 CCT
Lele27g1173 27 18894160 18897949 Lele03g0860 03 5014298 5020054 CCT
Lele03g0860 03 5014298 5020054 Lele03g0860 03 5014298 5020054 ECH
Lele02g0847 02 5151663 5155391 Lele03g0860 03 5014298 5020054 hybridization