Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0858 ATGTCAGCGATGGAGAGGCTAGGCAGCTACATTAGTCGGAGCGTGAACACTGTTTCCGGCCCTTTTCATCCTTTTGGCGGCGCTGTAGATATTGTTGTAGTTGAGCAGCGAGATGGGAGCTTCAAGTCGTCGCCATGGTACGTTCGATTTGGGAAATTTCAAGGTGTTTTAAAGGCAAAGGAGAGAATGGTCAACATTAGTGTTAATGGAGCGGAAGCCGATTTTCAAATGTATTTGGATCATAAAGGAGAAGCATTCTTTATCGGCGAAATAGATGCTGAAGATGGTGAATCTATATTATATCCATCATCTTCTAGCGATGAGACAGATAGCCGACCTCAGGATAATAAGCGCCTTTTGAAGTCCGAAAGTTGTAATTTTGAGACGGACAAGTCAAATTCAGGTGCTCATGTTGATATAAACAATGGTAAACTATTGGCCCGGACTAATTCTCGCCGATCACGGCTGCTTGGTTTTGTATTGAATCGAAGGTCGATGAAGGGCAATAATGGCATTCGCAGGGAAGTAGAACTAAACAGGGTAGATTCATTGGAGCGTGCCGAGATTGCAGCTAACCTTTTGGAGTTAAAATGGTCTACCGATCTTGCAGGCTGTAAACCAGCTCGTAAAGATAGCATAAAAACTCGGCAGAGCTCGCCTTTCCACGATAACACTGAGAATGCTTTGTGCCAATGTAAATTAAACGAGGAACCTTGTTGCTGCTCCAAGCAAGAAGGCATCGGTTGTTCCAAATCTGAATTTGAAGGAACTGGCGAGGAGGAGAGGATAAACCCGTCATATTTAAGCACCCAGGACAAAATGGTTGAAAATTTTGTTGCAGGTGAAGGCTTTACAGAAGGGAAAACAAAGGTGAGAGCGGAAGTATCAACAATAATTGATGTTGATAAGGATACTGAAGTTAACCCAAATGGGAAGGAAGTTGCATTTGATAGCACTAGTTCTGATTTACAAGTTGCATGTGTAAAGCTCGAATCACACTTTGAAAAGCAACTGAGTGGAGAAAAGGTTTCTGGAATTTCGGGGGAGGATTTTTCAGCAAATGGAGATGGATCTTTTGTTTATTGCAAGACATTAGAGAGATCGATGATGGGCACGGATTGTTCCACTGATCAAACTCACGAGGTGTTTTACCTTTCTAGTGGAGGATGTGAATGTCAACAAGTCCATGTGCAGGCTGAAATCTTACATGCCACAAATGTCCTCCTTCCTGAGGTCACAAAAAGTGAGGAAGACGTTAAAAATGTTGATCTCGGGATGCCAGCGGCAGCTTGTGATTTTCATTCTAAAGACCCAACAATGATGCCAAATCCTCAAATTTTCAATTTGGATCCAGAACTTTGTTCAGTTGAGGAGGTTCAGTCAAATTATGTTGCAGCAACTTCCTGTTACAGCTGCCTGGATAACCAAGTCTTGGATGAGAATGATGATTCAAGCATGTTATCATCTCCCCAGGTTTCTATTGGCGATTGTGTCCTTAGCAATGCTACAAGTAGACCTCCACCAAAGGAAGTGCATGCCCACTCCACTGATATGGATAAATGCCAAATTACCGATCCGTGTAATGGATCAATCTCCCCTGATTTTGTAGGTGAAGATCATATTTCATATTTGGATAGCATTGAAAAAGTGAACGGGGTAGTTGATACAAATTGTGGTTCACGTTCATCTCCGGAAAGCTCAACCACTAAAAGTCACATGGATGGCCTTCAAGAGTTTAGACAAACATGTCCCATAGTTATCCCTAGAAATAAGGCTGCCAGGGAGGAAGTTGACCTGCTGACAGGATCCTTGCCCAAGATGTCTTCTCATAGTGACAGTCTTAATAAACATGATGTTTCTCATCCTTTAAGTCAATCACTTGACTCAAAGTCCAAATCGTTGAAGTTGACATCTCCCACCAAGAATTACTTCAAACGTCTAAAATCAGACGGAGACAAAGAAAACCAGTTATTGGATGAGGAGTTAGGTGACAACTTCAAGAGTACCGTTCTGAATCCTCCCATTGGAGATCCATCAAGACTCAACCGTTCTCCTGGTGGAAACTGGGGGCTTTGGCGTTTCTCCTTCAGGAGATCAAGATCTGGAAGGGCTGAGCAGCCTGCTCACAGTGATGCCAAAAATACTACTTCTGGCAATGCTTCAGAGGGTACAATGGGTACTGATGCAGAAAAAAATGAGCTCAAGCCCAATCAAAGAAGGAAAAAGGTCAGGACAAGGACTCCAACGTCTGAACAGCTGGCATCCTTAAATCTTAAGAAAGGGAGGAATACAGTAACCTTCACATTCTCTACTGATATGCTGGGGAAGCAACAGGTTGATGCTCAAATATATTTGTGGAAATGGAACACCCGTATAGTGATCTCAGATGTGGATGGGACAATTACAAGACAAGCTCATGCAGAGTTCTCATATCATATTCAAGTGCGTCTGTCAGATGTTTTAGGACAGTTCATGCCTTTGGTTGGAGTAGATTGGTCACAAACTGGGGTTGCGCATTTATACTCAGCTATCAAGGAAAATGATTACCAATTGCTTTTCCTTAGCGCTCGTGCAATTTCTCAGGCCTATCGCACCAGACAATTCCTATTCAACCTTAAGCAGAATGGAAAAGTCTTACCTGATGGTCCTGTTCTTATTTCCCCAAATGGACTTTTTCCCTCCCTATATCGAGAAGTTATCAGAAGGGCCCCACATGAATTCAAAATTGCATGCTTAGAGGGAGAGGTTGCTGTAAACCATCTTCTTGATACAAAATCATATACTTCTCTTCATGCTCTCGTAAATGGAATGTTCCCCGCTACGAACTCATCTGAGCAGACTGCACCGCTTCTAGAATTACCCGGGTTTGAGGATTTTCTTAAGTTTGAAGAAGATATCCTTGATGTGACTTTATCTTGA 2919 0.4262 MSAMERLGSYISRSVNTVSGPFHPFGGAVDIVVVEQRDGSFKSSPWYVRFGKFQGVLKAKERMVNISVNGAEADFQMYLDHKGEAFFIGEIDAEDGESILYPSSSSDETDSRPQDNKRLLKSESCNFETDKSNSGAHVDINNGKLLARTNSRRSRLLGFVLNRRSMKGNNGIRREVELNRVDSLERAEIAANLLELKWSTDLAGCKPARKDSIKTRQSSPFHDNTENALCQCKLNEEPCCCSKQEGIGCSKSEFEGTGEEERINPSYLSTQDKMVENFVAGEGFTEGKTKVRAEVSTIIDVDKDTEVNPNGKEVAFDSTSSDLQVACVKLESHFEKQLSGEKVSGISGEDFSANGDGSFVYCKTLERSMMGTDCSTDQTHEVFYLSSGGCECQQVHVQAEILHATNVLLPEVTKSEEDVKNVDLGMPAAACDFHSKDPTMMPNPQIFNLDPELCSVEEVQSNYVAATSCYSCLDNQVLDENDDSSMLSSPQVSIGDCVLSNATSRPPPKEVHAHSTDMDKCQITDPCNGSISPDFVGEDHISYLDSIEKVNGVVDTNCGSRSSPESSTTKSHMDGLQEFRQTCPIVIPRNKAAREEVDLLTGSLPKMSSHSDSLNKHDVSHPLSQSLDSKSKSLKLTSPTKNYFKRLKSDGDKENQLLDEELGDNFKSTVLNPPIGDPSRLNRSPGGNWGLWRFSFRRSRSGRAEQPAHSDAKNTTSGNASEGTMGTDAEKNELKPNQRRKKVRTRTPTSEQLASLNLKKGRNTVTFTFSTDMLGKQQVDAQIYLWKWNTRIVISDVDGTITRQAHAEFSYHIQVRLSDVLGQFMPLVGVDWSQTGVAHLYSAIKENDYQLLFLSARAISQAYRTRQFLFNLKQNGKVLPDGPVLISPNGLFPSLYREVIRRAPHEFKIACLEGEVAVNHLLDTKSYTSLHALVNGMFPATNSSEQTAPLLELPGFEDFLKFEEDILDVTLS 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0858 972 SUPERFAMILY HAD-like 784 913 IPR036412 -
Lele03g0858 972 PANTHER LIPIN 1 913 IPR026058 -
Lele03g0858 972 MobiDBLite consensus disorder prediction 603 634 - -
Lele03g0858 972 MobiDBLite consensus disorder prediction 700 751 - -
Lele03g0858 972 Pfam LNS2 (Lipin/Ned1/Smp2) 745 913 IPR013209 -
Lele03g0858 972 MobiDBLite consensus disorder prediction 618 634 - -
Lele03g0858 972 MobiDBLite consensus disorder prediction 665 684 - -
Lele03g0858 972 SMART lns2 792 949 IPR031315 -
Lele03g0858 972 MobiDBLite consensus disorder prediction 708 726 - -
Lele03g0858 972 Pfam lipin, N-terminal conserved region 12 96 IPR007651 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0858 Lele-ChrLele03 5001231 5007770 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0903 25 5771105 5777581 Lele03g0858 03 5001231 5007770 CCT
Lele26g0909 26 5842400 5847919 Lele03g0858 03 5001231 5007770 CCT
Lele27g1175 27 18904952 18911556 Lele03g0858 03 5001231 5007770 CCT
Lele03g0858 03 5001231 5007770 Lele03g0858 03 5001231 5007770 ECH
Lele01g0863 01 4980702 4986524 Lele03g0858 03 5001231 5007770 hybridization
Lele02g0845 02 5133019 5139505 Lele03g0858 03 5001231 5007770 hybridization