Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0856 ATGGAGTGTGTTGGAGTGAAGGCGCCTCTCTCAGAATCATGTTCGAAGTGGTCTGAGGAGAAGCCAGCAATGGCAGATCGCCCTAAAGAGACTTCTTCTGAAGTTCTAAATCCACCAGACAATATTTATCCTTCCATTGAACCTCCAACCAATAATCAACTTAGCAACGGAAAACTGAAATCATCTACCACAAATTTGACAGAGACCACTGAATTTACAGCATCACCACATGCTTTGGATGGTCAAATTGCAGGCCAAAATGAATTTTCTCCTGCAGTTAATTCAACCTCAATCTCAAATACTGTGAATGATGTGAAAGAGAGAAGCAATCAGGAAATTGTTGTTGAACATACTGAACCAGAAGTTAAAGAAAATAATATCTCCAATAGTATAACTGCCACTTATAGCATTGATGATCATAACCAAATCATATCAGATTCCTATCATGAAACACAAGATTTGCAGAGTTTCCACAATGAAGAAAAGAGTTATCCGCCTTTAAAGGTCGCCGGTGCTGAAGATGATGATGAGTTTATACTTCCAGCTTCCTCTTTTGATACAAAAGATTTTCAAAATGACCTTAACGAAGTAAAGCTTGATTCTCCTCAAGCACATGCTAGTGGTTCCACTTTTGAAGTCTTGGAAATACTTCAGACTGCTGATCGTAATAATGAGACTGGACAATCATCTTCCTCTTCAAGAGCAAAGGATTTGCAAAATGACCATAATGAACAAAAGACTGATCCACCTCAAGTAAATGTTGCCAGTGCTACAACTGAAGTCTTGGGAACAATTTACAATGATGATCATAATGAAAGTACACCATCATCTTCCCATTTAGAACTAAAAGATTTGCAGAATGATCACGATGAACTAAAGATCGATTCACCAGATAAACAAGTTGCCGGTCCTGCTGTTGAAGACCATGGAATGGTTAACACTAATAGTGATCATGATGAGATTACAGAATTAAACTCCTCTAGTGGAGTAAGAGATTTGCAAGATGATCTCAACGAGCTAAAGATGAATCCACCTGAAGTACAGGTTATGAATGCTGCTAATACTGAAATCTTGGAAATGGACGAGACTCTTACACATGCTAAGCAGGTTGGCCATATTGATACAGCAGCTCCAATTGAATCTGTCAAAGCAGCTGTTTCCAAATTTGGAGGAATCGTTGATTGGAAGGCTCATAGAAACCAAACAGTGGAAAGACGCCAACATGTAGAACAAGAACTGCACAAAGCACAAGAGGAGATTCCGGGATATAGAAAACAATTTGAGGCTTCTGAACAGGCAAAAATCCGAGTATTAAAGGAGTTGGATAGCACTAAAAGATTAATAGAAGAGCTGAAGCTAAACTTAGAGAGGGCACAAACAGAAGAGCGCCAAGCAAGGCAGGACTCAGAGCTTGCGAAGCTTAGAGTTGAAGAAATGGAACAGGGTATTGCAGATGAAGCCAGTGTAGCAGCCAAGGCACAGCTTGAAGTTGCTAAAGCCAGGTTTTCAGCAGCTATTTCTGAACTAATGTTTGTGAGAGAAGAGTTGGAAGGATTGCGCAAAGAATATGCTTCCTTAGAGATTGATAAAGATGTAGCTGCTAAGAAAGCTGAAGAAGCTGTTCTTGCATCAAAAGAAGTGGAGAAGACTGTAGAAGAATTGACCATTGAATTAATTGCTGCAAAAGAGTCATTTGAGTCGACTCATTCTCCACACTTGGAAGCTGAGGAAAAAAGAATAGGAACAATCATGGCTAGAGATCAAGATTCTCATAACTGGGAGAAGGAAATTAAACAGAAAGAAGAAGAGATCCATAAACTGAGCCAGCATATTTTTTTAACAAAGGATCTCAAATCTAAACTAGACATAGCCTCTGGCGTGCGGCTTGATCTAAAAGCTGAATTAGCTGCTTATATGGAATCAAAAGTGATGCAAGAACATGATGTTGAGGGAGTTTCAGAAATAAAACCAGAGGAACTGGAGAAGAAAACACATATTGAAATAGTGGCAATAGTGGCATCAGCAAGAACGGAACTTGAGAAAGTGAAGATCAATTTGGAGGAACGAGCTAATGAGGTTAATCGCTTGAAGGTGACTGCTGCATCATTAAAATCAGAACTTGAACAAGAGAAATCAACTCTTGCCACCATTAGGCAGAGAGAGGGAATGGCATCCATTGCTGTTGCTTCACTTGAAGCAGAACTAGAGAAGACTATAACTGAAATGGCTGAAATACAAATGAAGGAGAAAGAGGCTAAAGAAAAAATGGTTGAGCTACCTAAGAAACTACAAAAAGCAGCTGAAGATGCTGACCAGGTCAACTTATTTGCTCAAGTAGCTCGTCAAGAGCTGATAAAAGTAAAGGATGAGGCAGAACAAGCCAAGGCTGCAGCAACTACAGTGGAAAGCAAATTACTTGCAACCCAGAAGGAGATAGAGGCAGCTAAGGCTTCTGAGAAGTTGGCTATAGCAACGATCAAAGCATTGCAAGAGAGTGAGTCAGCTAGAAAAAACCCTGATGGAGACCCTTCAAATGGAGTGACACTTTCTTTAGAGGAATACTATGAACTCAGCAAACGTGCCCATGAGGCAGAAGAGCAAGCCAATTTGAGGGTTATAGCGGTTAATTCTGATATTGAGATGGCTAGGGAATCTGAATTGAAAACCTTGGAGAGATTGGAAGAAGTGAATCAAGAGATGTCTTCCATAAGGGAATCTCTGAAGGTGGCAATGGATAAAACCGAAAAGGCAACAGAAGGAAAATTAGCTGTAGAACAAGAATTAAGAAAGTGGAGGGCTGAACATGAACAGAGAAGAAAGGCTGGTGACTCTGACCAAGGAGTGGTAAACCAAACTCAAAGCCTTACGGTTGGTTCTGAGGGGACTAGGGAAGTAACTTTCCTAGAAGAAGCTCCCGAGGAAGGAGGTCCTGGGCATTATTTGTCAAGTTCAAAGTGTGATGTACATGAAAACAACGCTGACAATGGACCAGCCCCAGAGAAAAAGAATAGTAAGAAGAAAAAGAGGTCATTATTCCCACGTGTTTTAATGTTCTTTGCTAGAAGAAAATCAACAAAGTCTTAG 3084 0.4024 MECVGVKAPLSESCSKWSEEKPAMADRPKETSSEVLNPPDNIYPSIEPPTNNQLSNGKLKSSTTNLTETTEFTASPHALDGQIAGQNEFSPAVNSTSISNTVNDVKERSNQEIVVEHTEPEVKENNISNSITATYSIDDHNQIISDSYHETQDLQSFHNEEKSYPPLKVAGAEDDDEFILPASSFDTKDFQNDLNEVKLDSPQAHASGSTFEVLEILQTADRNNETGQSSSSSRAKDLQNDHNEQKTDPPQVNVASATTEVLGTIYNDDHNESTPSSSHLELKDLQNDHDELKIDSPDKQVAGPAVEDHGMVNTNSDHDEITELNSSSGVRDLQDDLNELKMNPPEVQVMNAANTEILEMDETLTHAKQVGHIDTAAPIESVKAAVSKFGGIVDWKAHRNQTVERRQHVEQELHKAQEEIPGYRKQFEASEQAKIRVLKELDSTKRLIEELKLNLERAQTEERQARQDSELAKLRVEEMEQGIADEASVAAKAQLEVAKARFSAAISELMFVREELEGLRKEYASLEIDKDVAAKKAEEAVLASKEVEKTVEELTIELIAAKESFESTHSPHLEAEEKRIGTIMARDQDSHNWEKEIKQKEEEIHKLSQHIFLTKDLKSKLDIASGVRLDLKAELAAYMESKVMQEHDVEGVSEIKPEELEKKTHIEIVAIVASARTELEKVKINLEERANEVNRLKVTAASLKSELEQEKSTLATIRQREGMASIAVASLEAELEKTITEMAEIQMKEKEAKEKMVELPKKLQKAAEDADQVNLFAQVARQELIKVKDEAEQAKAAATTVESKLLATQKEIEAAKASEKLAIATIKALQESESARKNPDGDPSNGVTLSLEEYYELSKRAHEAEEQANLRVIAVNSDIEMARESELKTLERLEEVNQEMSSIRESLKVAMDKTEKATEGKLAVEQELRKWRAEHEQRRKAGDSDQGVVNQTQSLTVGSEGTREVTFLEEAPEEGGPGHYLSSSKCDVHENNADNGPAPEKKNSKKKKRSLFPRVLMFFARRKSTKS 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0856 1027 MobiDBLite consensus disorder prediction 1 109 - -
Lele03g0856 1027 Coils Coil 399 426 - -
Lele03g0856 1027 MobiDBLite consensus disorder prediction 46 76 - -
Lele03g0856 1027 MobiDBLite consensus disorder prediction 222 254 - -
Lele03g0856 1027 Coils Coil 672 720 - -
Lele03g0856 1027 Coils Coil 509 564 - -
Lele03g0856 1027 Coils Coil 434 477 - -
Lele03g0856 1027 MobiDBLite consensus disorder prediction 933 1012 - -
Lele03g0856 1027 Coils Coil 890 913 - -
Lele03g0856 1027 MobiDBLite consensus disorder prediction 944 961 - -
Lele03g0856 1027 Pfam Weak chloroplast movement under blue light 371 938 IPR008545 -
Lele03g0856 1027 MobiDBLite consensus disorder prediction 87 108 - -
Lele03g0856 1027 Coils Coil 728 755 - -
Lele03g0856 1027 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 371 1021 - -
Lele03g0856 1027 Coils Coil 777 797 - -
Lele03g0856 1027 Coils Coil 590 610 - -
Lele03g0856 1027 MobiDBLite consensus disorder prediction 222 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0856 Lele-ChrLele03 4989269 4992533 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g0228 28 1322606 1328160 Lele03g0856 03 4989269 4992533 CCT
Lele25g0898 25 5745443 5748503 Lele03g0856 03 4989269 4992533 CCT
Lele26g0905 26 5806522 5810999 Lele03g0856 03 4989269 4992533 CCT
Lele27g1181 27 18935644 18938710 Lele03g0856 03 4989269 4992533 CCT
Lele03g0856 03 4989269 4992533 Lele25g0873 25 5585800 5590462 CCT
Lele03g0856 03 4989269 4992533 Lele26g0885 26 5664529 5669839 CCT
Lele03g0856 03 4989269 4992533 Lele27g1206 27 19083783 19087627 CCT
Lele03g0856 03 4989269 4992533 Lele28g0866 28 5582052 5586724 CCT
Lele03g0856 03 4989269 4992533 Lele03g0856 03 4989269 4992533 ECH
Lele01g0861 01 4969567 4972831 Lele03g0856 03 4989269 4992533 hybridization
Lele02g0841 02 5113822 5117121 Lele03g0856 03 4989269 4992533 hybridization