Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0848 ATGAAGAATGTGAAGAACGACCCTGCCGTCCATAACAATGGTGTCGGAAGTCAACCAGGGAATTTTTCCCTGGCGCGACAGCCGTCCGTCTACTCTCTGACATTCGACGAATTCATGAATACCATGGGAGGTCCAGGAAAGGACTTTGGGTCCATGAACATGGACGAGTTGCTCAAGAACATTTGGACAGCTGAAGAAATGCAACCAATGGCGTCCACGACCGGTTTTCAACCGGTGGCCGGCATCTCTGGTGGTGGCCATTTGCAGAAACAAGGCTCATTGACACTGCCACGGACAATTAGCCAGAAGACAGTGGATGAAGTCTGGAAGGATATTTCCACTGGTCCTGGAGGCCCCAGTTTGCCTCAAAGGCAGCAGACTTTGGGAGAGATGACACTGGAGGAGTTCCTGGTCAGAGCCGGGGTGGTAAGAGAAGAGATACAATTAGATGAAAAGCCAAACGGAGAGCTTTTCGCTGATTTCTCTCGGACAGGGAATCACAGTGGTTTAGAGATGGGTTATCCGCAGTTCAACAAGGGTGCAGGGATAGTGGGAAGCCCGATTCCCGGGAATAACAACGATCGTTTAACTCTTCCATCGCCCACCAATTTGCCGTTGAATGTTAACGGGATTGGATCGAATCAGCAACAGTTGCCTAATTCACAACCACCGCAGCTGCAACCACATATACTTCCAAAGCAGCCTGCTATGCCTTATGCAACTCCAATGCCATTAATGAACAATCAAGGAATCAAGAGCGGAATAGTGGGGCTTGCTGATCAGAAGGGTAATATAGTTCCAGGTTCTGCACTGCATGGTGGAGGGATCGATGGTATGGATTTAGGACATGGGGGTGTTCCCGTAGCTACAGGATCTCCAGCGAATCAACTGTCGTGCGATGAAACTGGGAAGATTAGTGGTGATACTTCGTCCGTATCGCCAGTTCCGTATGTATTCAATGGCGGTTTTAGGGGAAGGAAGAGCAGTGGAGCTGTGGAGAAGGTGATTGAAAGGAGGCAGAGGAGAATGATAAAGAACAGAGAATCAGCTGCTAGGTCGAGGGCTCGCAAGCAGGCATATACCACGGAATTGGAAGCAGAAGTTAAAATGTTAAAAGATGAAAACCAAGAACTGCAAAGGAAGCAGGCTGAAATCATAGAAATTCGAGAGAAAAAAATTATGGAGATGATAAATATGCAACGAGGAGTCAAGAAAAGACGCTTAAGACGAACTCAAACTGGACCATGGTAG 1251 0.4796 MKNVKNDPAVHNNGVGSQPGNFSLARQPSVYSLTFDEFMNTMGGPGKDFGSMNMDELLKNIWTAEEMQPMASTTGFQPVAGISGGGHLQKQGSLTLPRTISQKTVDEVWKDISTGPGGPSLPQRQQTLGEMTLEEFLVRAGVVREEIQLDEKPNGELFADFSRTGNHSGLEMGYPQFNKGAGIVGSPIPGNNNDRLTLPSPTNLPLNVNGIGSNQQQLPNSQPPQLQPHILPKQPAMPYATPMPLMNNQGIKSGIVGLADQKGNIVPGSALHGGGIDGMDLGHGGVPVATGSPANQLSCDETGKISGDTSSVSPVPYVFNGGFRGRKSSGAVEKVIERRQRRMIKNRESAARSRARKQAYTTELEAEVKMLKDENQELQRKQAEIIEIREKKIMEMINMQRGVKKRRLRRTQTGPW 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0848 416 Pfam bZIP transcription factor 338 391 IPR004827 GO:0003700|GO:0006355
Lele03g0848 416 Gene3D - 336 392 - -
Lele03g0848 416 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 341 356 IPR004827 GO:0003700|GO:0006355
Lele03g0848 416 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 24 416 IPR043452 GO:0003700|GO:0045893
Lele03g0848 416 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 336 396 - -
Lele03g0848 416 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 336 385 IPR004827 GO:0003700|GO:0006355
Lele03g0848 416 MobiDBLite consensus disorder prediction 1 23 - -
Lele03g0848 416 Coils Coil 357 391 - -
Lele03g0848 416 SUPERFAMILY Leucine zipper domain 338 384 IPR046347 GO:0003700|GO:0006355
Lele03g0848 416 SMART brlzneu 334 398 IPR004827 GO:0003700|GO:0006355
Lele03g0848 416 CDD bZIP_plant_BZIP46 338 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0848 Lele-ChrLele03 4957871 4961520 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0848 24 416 bZIP Transcription Factor Family AT3G19290 47.183 1.59e-94 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele03g0848 bZIP_1 1.2e-12 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0848 03 4957871 4961520 Lele03g0848 03 4957871 4961520 ECH
Lele01g0855 01 4940680 4944075 Lele03g0848 03 4957871 4961520 hybridization
Lele02g0833 02 5084578 5091369 Lele03g0848 03 4957871 4961520 hybridization