Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0845 ATGGACTGTGGCACCAGTGATGGGCCAAAGTGGTCATTCTCATGGGCGTCGCATGATGAGATGGACTTCACGACGCTGCCCCCGCAATTCTCAGGAGCTTACACTCACCATGTTGAAGAGACGGCGGGCTTGCCTCTGCCACCGCCTGAGCTCTGTGGAACAACACCGACGATCAAAAAACCTAATTGGTGGTCACTCGCGAGTACAAGTACATCAACGTCGTCGTCTCTGGGTAACCCTAGGTCAAAACAACAGGAGCAAGCTAACTCGATGAGGGAGATGATATTTAGGATAGCGGCGATGCAACCGATACACATAGATCCAGAATCAGTGAAGCCTCCAAAGAGGAAGAACGTCAAGATATCGAAGGACCCTCAGAGCGTGGCGGCTCGGCATCGCAGAGAAAGAATCAGCGAGAGAATAAGGATACTGCAGAGATTGGTGCCAGGTGGCACTAAAATGGACACCGCCTCTACGTTAGATGAAGCTATTCACTACCTCAAATTCCTGCAGTCCCAGGTTCACTCCCTCCAACGAGCTGCAGCCTCAGATAATACCCCAACATCGTCACTCGCTGATCTCTTCATGTCCTCAGCTGGCGCCAATAATAATCCATCCTCTAATTATCTTTATCTGCATAAACCTCCCCAGCTTCCTCATAATCCACACCATTACTGCTGA 681 0.5037 MDCGTSDGPKWSFSWASHDEMDFTTLPPQFSGAYTHHVEETAGLPLPPPELCGTTPTIKKPNWWSLASTSTSTSSSLGNPRSKQQEQANSMREMIFRIAAMQPIHIDPESVKPPKRKNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASTLDEAIHYLKFLQSQVHSLQRAAASDNTPTSSLADLFMSSAGANNNPSSNYLYLHKPPQLPHNPHHYC 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0845 226 MobiDBLite consensus disorder prediction 109 133 - -
Lele03g0845 226 SMART finulus 127 176 IPR011598 GO:0046983
Lele03g0845 226 Pfam Helix-loop-helix DNA-binding domain 131 171 IPR011598 GO:0046983
Lele03g0845 226 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 121 170 IPR011598 GO:0046983
Lele03g0845 226 Gene3D - 120 189 IPR036638 GO:0046983
Lele03g0845 226 MobiDBLite consensus disorder prediction 67 88 - -
Lele03g0845 226 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 70 207 IPR045843 GO:0003700|GO:0006355
Lele03g0845 226 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 125 180 IPR036638 GO:0046983
Lele03g0845 226 FunFam BHLH transcription factor 124 188 - -
Lele03g0845 226 MobiDBLite consensus disorder prediction 108 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0845 Lele-ChrLele03 4946296 4946976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0845 72 192 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 73.171 1.02e-45 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele03g0845 HLH 3.6e-08 No_clan