Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0844 ATGGCTCTTCTTCTGGACAATTGCGATGCCATATTACTCTCCCTTGACTCTCACAAGTCGGTGCCCGCTCCATTCCTCACCAAGACCTACCAGCTCGTCGATGATCCCGCCACCGATCACATCGTCTCTTGGGGTGAAGACGACACCACTTTCGTCGTCTGGCGTCCCCCTGAGTTTGCTCGTGATCTCCTCCCCAACTACTTCAAGCACAACAATTTCTCCAGCTTCGTTCGCCAGCTCAACACCTATGGTTTCAGAAAGATTGTGCCGGACAGATGGGAGTTTGCCAATGAATTCTTTAAGAAGGGAGAGAAGCACTTGCTGTGCGAGATCCACCGCAGGAAAACGGCTCAGCCTCATCATCATCAGAACCACCACGGCGTTGGCGTCCCTGGTTTCTTTCCCTTTCCTTCCAGGCTCAGCATCTCTCCTCCCAGTGACTCCGACGACCAGCACAATTGGTGTGACTCACCGCCGCTCACTTCTCCGGCTCCCATTTCTTCCCTCATCAACGGCGATAACTACAACTCTTCCTTCACCGCTCTTTCCGAGGACAACGAAAGGCTCAGACGAAGCAACAACATGCTCATGTCCGAGCTCGCACACATGAAGAAGCTTTATAACGACATCATCTACTTCGTTCAGAACCACGTCAAACCGGTCCCTCCCAGCAGTTCCTACCCTTCCTCTTTGCTGTCTCGGCCCATGACCACCGCCACTACTAATGGTTCCATGGCGCAAAGGCCCCTGAACCAGCTTTTGGGGTATTATTCCATGAACAATAAGCAAGCTCCGCCTCTTGTGAACTCACCCACCAACACATCGAAGAGCTCCATAACCATAGTTAAAGAGCCCACCAATAACAGCTGTAAGACCAAGCTCTTTGGTGTGTCGCTTCAATCTAAGAAAAGAGTGCACCCTGAGTACGGTTTTAATCCCTCCAATTCTTCGGATGCCAGCAAGGCTCGTTTCGCTTTGGAAAAGGATGACTTGGGCTTGAATCTCATGCCTCCTTCGACTTTTACATAA 1029 0.5112 MALLLDNCDAILLSLDSHKSVPAPFLTKTYQLVDDPATDHIVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANEFFKKGEKHLLCEIHRRKTAQPHHHQNHHGVGVPGFFPFPSRLSISPPSDSDDQHNWCDSPPLTSPAPISSLINGDNYNSSFTALSEDNERLRRSNNMLMSELAHMKKLYNDIIYFVQNHVKPVPPSSSYPSSLLSRPMTTATTNGSMAQRPLNQLLGYYSMNNKQAPPLVNSPTNTSKSSITIVKEPTNNSCKTKLFGVSLQSKKRVHPEYGFNPSNSSDASKARFALEKDDLGLNLMPPSTFT 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0844 342 SMART hsfneu3 21 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele03g0844 342 FunFam Heat stress transcription factor B-4 17 115 - -
Lele03g0844 342 Gene3D - 17 116 IPR036388 -
Lele03g0844 342 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 18 266 IPR027725 -
Lele03g0844 342 SUPERFAMILY "Winged helix" DNA-binding domain 22 114 IPR036390 -
Lele03g0844 342 ProSitePatterns HSF-type DNA-binding domain signature. 64 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele03g0844 342 PRINTS Heat shock factor (HSF) domain signature 25 48 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele03g0844 342 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele03g0844 342 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele03g0844 342 Pfam HSF-type DNA-binding 25 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0844 Lele-ChrLele03 4939307 4940832 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0844 1 340 HSF AT1G46264 55.914 4.36e-118 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lele03g0844 HSF_DNA-bind 2.5e-32 CL0123