Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0838 ATGGAAGAGCCTCAATGCTCCAGAGTCACTTTGCCTGCCTCGCTCCCACCTGGTTGCGGTTTCGATCCATCCGGAGAGCAGCTGCTCTTTTACTATTTAACCAACAAGAACGCCGGCGGTAATTTCCATGGTTGTGATCTGATCAGGGAGCTTGACCTGTACGATTACGATCCTTTCCAATTGCCTGAAATTGCGTGCTTTTCCTATGGTTATCGCGGAAGGAGGAGGCATTGGTACTGTTATACTGCCAGGGTTTTGAAGGATGCTAGGAAGAAGACTAGGATGGTCAAGAGCGGGCATTGGATGAGAAAGGGAGGGGTTAGGAATGTTTTGAATGGTGGTGGGAATGCCGTCTTGGGCACCAGGACCACTTTCGTTTTCTATCTGGGGAATTCCCCCAAGAAAGCCAGCAGGACGAATTGGATGTTGCATGAGTATGCACTAGTTGATCATCTTAAGGCTTCTTTTGTTGTTTGTCGAGTATTTTTTAAAGCATGTTATAAGAATAGTGTGTCAGAGAATGGTCTGTGTCCCTATGCGGAGGAAAGTTTCTCAGCTGTACGTCACATCGGCATTCAGCATGATGGATATGTTTCACCTGATATAATTGAGGCTCAAATGCGGGGTGACTGCTCCATTGATAGAAAGATTGCAGCGTCTCCCTTGACACCTGCTAGTGAACTAGATGAGAATCAAACTGCAGCTGCGTCAGCTTCTATTGCTGCTTTCCAGTATTGTACAGGTCCTCAAGACTGTCAAACGGGAAAGTTTTCTGGACTTCCTGGTGGTGGTGCAACATTTGTTGAAGACTTGGCATCTCGGCAACATTTATTTTCGATTCTAGAGGAGGATTTCATAGAGTTGGATGATCTAGCTTGA 879 0.4619 MEEPQCSRVTLPASLPPGCGFDPSGEQLLFYYLTNKNAGGNFHGCDLIRELDLYDYDPFQLPEIACFSYGYRGRRRHWYCYTARVLKDARKKTRMVKSGHWMRKGGVRNVLNGGGNAVLGTRTTFVFYLGNSPKKASRTNWMLHEYALVDHLKASFVVCRVFFKACYKNSVSENGLCPYAEESFSAVRHIGIQHDGYVSPDIIEAQMRGDCSIDRKIAASPLTPASELDENQTAAASASIAAFQYCTGPQDCQTGKFSGLPGGGATFVEDLASRQHLFSILEEDFIELDDLA 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0838 292 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 14 193 - -
Lele03g0838 292 Gene3D NAC domain 25 167 IPR036093 GO:0003677|GO:0006355
Lele03g0838 292 Pfam No apical meristem (NAM) protein 16 148 IPR003441 GO:0003677|GO:0006355
Lele03g0838 292 SUPERFAMILY NAC domain 12 164 IPR036093 GO:0003677|GO:0006355
Lele03g0838 292 ProSiteProfiles NAC domain profile. 15 164 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0838 Lele-ChrLele03 4896134 4898713 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0838 14 182 NAC Transcription Factor Family AT3G15500 33.708 4.04e-24 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele03g0838 NAM 7.3e-22 No_clan