Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0837 ATGGGAAGCATGAAGGTGCATCAGTTGGCACGTGGACTCATGTGGGAGCACGAACCCTCCCTCACCCTTGGCTTCAAACGCTTACGCCCTCTTGCCCCCAGGCTCCACAACACTACTGCTAACTCTCTTTCCTCTTTCGATCTCAACACCTTCATCAGACCCGACAGTGGCCCCAGAAAACTCCCTTCCCCTCACCATCACCTTCACAAAGAGGAATCGCAGCCAGGAGGAACGAGGTGGAATCCCACTCAGGAACAGATAGGTATATTGGAGATGCTCTACAGAAGTGGAATGCGAACTCCAAATGCTGAGCAGATAGAGCAGATCACTGTTCAGCTTGGCAAATACGGCAAGATCGAAGGCAAGAATGTCTTCTATTGGTTCCAAAACCACAAAGCCCGCGAAAGACAAAAGCAGAAACGTAACCCTAATACTAATAGTACCACTTCTTCGATTTCTTTAACTTTAGACACACGGGGGCAAGTAGGAGAAGGAGAGGAAGATAGCCCTCTGAGGAAGAAGTGTAGGAGCTTGGCGTTTGAGTGTTTTCAATTAGAAGAAAGCAGGTTGTTACCTAGAGATGAGGAATATAAAACTCTGGAGCTTTTCCCATTGCAGCCGGAAGGCAGATGA 633 0.4834 MGSMKVHQLARGLMWEHEPSLTLGFKRLRPLAPRLHNTTANSLSSFDLNTFIRPDSGPRKLPSPHHHLHKEESQPGGTRWNPTQEQIGILEMLYRSGMRTPNAEQIEQITVQLGKYGKIEGKNVFYWFQNHKARERQKQKRNPNTNSTTSSISLTLDTRGQVGEGEEDSPLRKKCRSLAFECFQLEESRLLPRDEEYKTLELFPLQPEGR 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0837 210 MobiDBLite consensus disorder prediction 142 158 - -
Lele03g0837 210 SMART HOX_1 75 142 IPR001356 GO:0003677
Lele03g0837 210 CDD homeodomain 78 139 IPR001356 GO:0003677
Lele03g0837 210 SUPERFAMILY Homeodomain-like 75 142 IPR009057 -
Lele03g0837 210 PANTHER WUSCHEL-RELATED HOMEOBOX 4 4 210 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Lele03g0837 210 MobiDBLite consensus disorder prediction 54 82 - -
Lele03g0837 210 MobiDBLite consensus disorder prediction 59 74 - -
Lele03g0837 210 MobiDBLite consensus disorder prediction 133 172 - -
Lele03g0837 210 Pfam Homeodomain 78 137 IPR001356 GO:0003677
Lele03g0837 210 ProSiteProfiles 'Homeobox' domain profile. 73 138 IPR001356 GO:0003677
Lele03g0837 210 FunFam WUSCHEL-related homeobox 4 77 144 - -
Lele03g0837 210 Gene3D - 63 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0837 Lele-ChrLele03 4892313 4893047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0837 4 142 Wox Gene Family AT1G46480 61.438 2.65e-58 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele03g0837 Homeodomain 5.7e-19 CL0123