Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0836 ATGAGAAGCAAGGCAGAGAAGCGAAAGCAAGATGAATCCAGGCAGAAACCTTACAGAGGGATTCGGATGAGGAAGTGGGGCAAGTGGGTAGCGGAGATTAGAGAACCCAACAAGAGATCGAGGCTATGGTTGGGCTCCTACACCACCCCGGTGGCCGCCGCTCGCGCTTACGACACCGCCGTTTTCTACCTCAGAGGCCCTTCTGCTCGCCTCAACTTCCCCGAATTGTTATTCCAAGATGACGACCACCACCACCGCCTCGTCGTCCAGGGCCACATGTCCCCGGATTCCATTCGCAAAAGGGCCACCGAAGTCGGCGCCAGAGTTGACGCTCTCCAGGCCTCTCTTCATCACCCCAATTCTCATACCCAAACCCCCTCCGACAAGCCCGACTTGAATGAGTTCCCAAGACCCGAAGATCTTGTCGAGGATTACAATTAG 441 0.5578 MRSKAEKRKQDESRQKPYRGIRMRKWGKWVAEIREPNKRSRLWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPELLFQDDDHHHRLVVQGHMSPDSIRKRATEVGARVDALQASLHHPNSHTQTPSDKPDLNEFPRPEDLVEDYN 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0836 146 SMART rav1_2 17 80 IPR001471 GO:0003700|GO:0006355
Lele03g0836 146 MobiDBLite consensus disorder prediction 114 146 - -
Lele03g0836 146 SUPERFAMILY DNA-binding domain 17 75 IPR016177 GO:0003677
Lele03g0836 146 FunFam Ethylene-responsive transcription factor 2 16 75 - -
Lele03g0836 146 CDD AP2 18 76 IPR001471 GO:0003700|GO:0006355
Lele03g0836 146 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 3 141 - -
Lele03g0836 146 Gene3D AP2/ERF domain 16 75 IPR036955 GO:0003700|GO:0006355
Lele03g0836 146 Pfam AP2 domain 18 66 IPR001471 GO:0003700|GO:0006355
Lele03g0836 146 MobiDBLite consensus disorder prediction 132 146 - -
Lele03g0836 146 MobiDBLite consensus disorder prediction 116 130 - -
Lele03g0836 146 ProSiteProfiles AP2/ERF domain profile. 17 74 IPR001471 GO:0003700|GO:0006355
Lele03g0836 146 PRINTS Ethylene responsive element binding protein signature 56 76 IPR001471 GO:0003700|GO:0006355
Lele03g0836 146 PRINTS Ethylene responsive element binding protein signature 18 29 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0836 Lele-ChrLele03 4882025 4882465 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0836 14 144 AP2-EREBP Transcription Factor Family AT3G50260 58.156 1.95e-50 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele03g0836 AP2 3.8e-11 CL0081