Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0830 ATGCTCCAACAATATCATTTCTCCATTCTACTTCAAGTTCAAAACTCGCTGTTTTCTCTCTCTTCATTTCTGTTATTTTTACTCTGCTCCTTTGTTGCTCTTTCCAGGCCTCTCTTGCCTCATCCTCAACCTGCATTTCATCTGTTCTTACCTCCTGATGCTGACGCCTTGCTGTCATTTAAATTCAAAGCTGATCTCTACAATCGCCTCCTTTTCTCTCCTAACGCCTCCGGAGATGCTTTCTGCAAATGGCTGGGTGTTCAATGCAATGCAAAACAGAAAGTTGAGCGTCTTGTTCTTCAAGGTTTAGATTTCGGTGGTATTTTCGCTCCCAATACATTGTCTCGTCTTGACCAGCTCCGAGTGCTCAGTTTGCAGAACAACTCTCTCTTCGGACCCGTCCCTGATCTCTCCGGTCTCCACAACCTCAAGAGCCTCTTCCTTGACAACAACCACTTCACGGGTTCTTTTCCTCCTTCAATCCTCACCCTTCACAGGCTTCGTACGTTGGATTTATCTTGCAACAATCTTTCAGGGCCCATCCCTACCAACTTAACCAAGCTAGATCGTTTCTACTACCTCCGTCTTAGTTGGAATAGATTCAATGGCTCCATCCCTCCCTTCAATCAGTCTGCTCTCCGAACATTCGACGTCTCTGGTAACAACTTTTCCGGCCCTATTCCTGTCACGCTCACTTTAGTCTATTTCGGACCACCCTCCTTCTCTCACAACCCAGGCCTCTGCGGTGAAATCATCCACAAAGAATGCCATCCAAGTGCGCCTTTCTTTGCATCAGGGGCACCACTCAGGGCAGCTCCGCCGCCAGCTGTGCAGCTTGGTCAGAGTGCCCAAGTCCACGGCGTTGACGGACTAATTCGTCCCCCGTACAAGAAAAAGCACAACAGAAACGCAGTTATTATTGGATTCTCCGCAGGGGTTTGCATTCTCATCGTCTCGCTTGTCTGTTTCGGGGTGGCCTTCAGGAAACAGGGAGACAAGGAGTCTTCGAGGACTCTAATGGATTCCAATGGGGCAGCGACGGCAGAAGCGGCAGCGGCGATGCAAATGGAGCAAGAGAAGGAGCTGGAGGAGAAGGTGAAGCAGTGTGGTGGACGCAGCAGCTTCCATGATGACCCGGATTCTGCTGCGTACAAAGCGCCAGAGACACGGAATCCGAATCACCAGCCAAGCCCCAAATCTGACGTTTACGCTTATGGCGTGTTGTTGCTGGAACTCCTGACGAGGAAGCCTCCATCGGAACACCCATTCTTGGTGCCGACTGATAGGGTGAGTTGGGTGAAATCGGTGCGGGAAGATAATGGAGGAGAAGACAACAGAATGGAGTTGCTTGTTGAGGTTGCTACTACCTGTAGCTTGACCTCTCCTGAGCAGAGGCCCACTATGTGGCAGGTCTTAAAGATGTTGCAGGAAATTAAAGAGATTGTTTTATTGGAGGATGGTGCACTAGACCTACGCCCCATCGCCTCATAG 1491 0.4983 MLQQYHFSILLQVQNSLFSLSSFLLFLLCSFVALSRPLLPHPQPAFHLFLPPDADALLSFKFKADLYNRLLFSPNASGDAFCKWLGVQCNAKQKVERLVLQGLDFGGIFAPNTLSRLDQLRVLSLQNNSLFGPVPDLSGLHNLKSLFLDNNHFTGSFPPSILTLHRLRTLDLSCNNLSGPIPTNLTKLDRFYYLRLSWNRFNGSIPPFNQSALRTFDVSGNNFSGPIPVTLTLVYFGPPSFSHNPGLCGEIIHKECHPSAPFFASGAPLRAAPPPAVQLGQSAQVHGVDGLIRPPYKKKHNRNAVIIGFSAGVCILIVSLVCFGVAFRKQGDKESSRTLMDSNGAATAEAAAAMQMEQEKELEEKVKQCGGRSSFHDDPDSAAYKAPETRNPNHQPSPKSDVYAYGVLLLELLTRKPPSEHPFLVPTDRVSWVKSVREDNGGEDNRMELLVEVATTCSLTSPEQRPTMWQVLKMLQEIKEIVLLEDGALDLRPIAS 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0830 496 MobiDBLite consensus disorder prediction 367 399 - -
Lele03g0830 496 MobiDBLite consensus disorder prediction 367 384 - -
Lele03g0830 496 SUPERFAMILY Protein kinase-like (PK-like) 381 479 IPR011009 -
Lele03g0830 496 Coils Coil 345 365 - -
Lele03g0830 496 ProSiteProfiles Protein kinase domain profile. 94 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g0830 496 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 334 479 - -
Lele03g0830 496 Pfam Protein tyrosine and serine/threonine kinase 382 475 IPR001245 GO:0004672|GO:0006468
Lele03g0830 496 Gene3D Transferase(Phosphotransferase) domain 1 317 485 - -
Lele03g0830 496 SUPERFAMILY L domain-like 51 233 - -
Lele03g0830 496 Gene3D Ribonuclease Inhibitor 52 210 IPR032675 -
Lele03g0830 496 Gene3D Ribonuclease Inhibitor 211 260 IPR032675 -
Lele03g0830 496 Pfam Leucine rich repeat 142 201 IPR001611 GO:0005515
Lele03g0830 496 FunFam Nuclear pore complex protein NUP107 51 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0830 Lele-ChrLele03 4856187 4859171 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0830 376 489 Receptor kinase-like Gene Family AT5G43020 53.659 6.01e-30 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele03g0830 PK_Tyr_Ser-Thr 2.5e-06 CL0016