Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0828 ATGAGATACAGATGGTACTTCACTTTAATGGCCACTGCTCATGAAACTCCAACCTCTTTCTTTTCTCTCCCATTTTTCATCAGTAACTCTTGGGTGTGTGCTTGCCTCGGGAAAATGGAAACTGGACTGCCCTTGCTTAATTGCCTCTTGCAGCATACTCTGAGAAGCTTCTGTTCACCTTCTGACTCTTCCACTACTTCTTCTAAGTGGGTATATGCTGTCTTTTGGAGGATATTGCCGCGAAACTATCCTCCCCCAAGGTGGGAATTTGGAGGGACTGATCTTGATCGCTCCAAGGGAAATAAGAGAAACTGGATCCTGGTTTGGGAAGATGGATTCTGTGACTCTAACGCATGTGAAGGAGCAAGGAGCGGATACCTCAACGGGAAGTTTGGAGCTCACGTGTTCTTCAAAATGTCACATGAGGTCTACAGTTATGGGGAAGGATTACTGGGGAAAGTGGCTGCAGATAACAGTCACAAATGGGTGTACAGAGACAGCCCAAATGAGTCTGAACCTAGCTATATCGCTTCGTTGAATGAGTCCGTTGAGCCACGACCACGTGCGTGGGAATATCAGTTCAATTCAGGAATTCAGACCATTGTCATCATTGCGGTGAGAGAAGGCATAGTTCAATTGGGTTCGCTTAACAAGGTTGCAGAAGATCTCAGTCTAGTGATCAACATACAGAGGAAATTCAGCTTCCTTCAGAGCGTACCAGGCGTCTTCGCTATTCAAAGGCCATATCTACCCATCCAACATCCTTACGTGCTCAAACCTAACATCCCGATCATGAAAAGCAATGAAACGGTGCTCTCTGTGTACAATATGAATCAAATGAGTGGTTTGAAAAGGATGATTGAGGAAACACCAAACAATGCTTCAAGGAAATCTATTAACTTGGGCTGGAATTCCCCAATGGATGGAACAGCAGGGACATCTATTTGGCCAGTTCCTCCTTCCCTGCCCTTGCTGCCTAAGATCCCCTCTCTAGTTCCTTCCTATAATTATATTACACTTCTTCATGACGCTAGGATTAATAGCTCAAGCCATAGAGTGAAGGTTGAAGAGTTCGCATTTCATCACACTAATGAAGCTGATCAGAAATGTTACTTCAATACTGATATAGAGTAA 1134 0.4436 MRYRWYFTLMATAHETPTSFFSLPFFISNSWVCACLGKMETGLPLLNCLLQHTLRSFCSPSDSSTTSSKWVYAVFWRILPRNYPPPRWEFGGTDLDRSKGNKRNWILVWEDGFCDSNACEGARSGYLNGKFGAHVFFKMSHEVYSYGEGLLGKVAADNSHKWVYRDSPNESEPSYIASLNESVEPRPRAWEYQFNSGIQTIVIIAVREGIVQLGSLNKVAEDLSLVINIQRKFSFLQSVPGVFAIQRPYLPIQHPYVLKPNIPIMKSNETVLSVYNMNQMSGLKRMIEETPNNASRKSINLGWNSPMDGTAGTSIWPVPPSLPLLPKIPSLVPSYNYITLLHDARINSSSHRVKVEEFAFHHTNEADQKCYFNTDIE 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0828 377 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 50 233 IPR025610 -
Lele03g0828 377 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 40 351 - -
Lele03g0828 377 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0828 Lele-ChrLele03 4844886 4847351 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0828 51 237 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 31.606 8.04e-18 83.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0828 03 4844886 4847351 Lele03g0828 03 4844886 4847351 ECH
Lele01g0836 01 4829228 4832098 Lele03g0828 03 4844886 4847351 hybridization
Lele02g0812 02 4956696 4959140 Lele03g0828 03 4844886 4847351 hybridization