Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0805 ATGGTAACTGCAGTTGCTACGACGATAAACCCCAAAACCACGACCAAAGGAGGTCCTGCTCATCCGTCTCACCGCCCAACAAGGACTCCTCTCTTAACCTCAGAATCCGACAATGCACTCACTCCTCGCAGACCCAAACTCCAGCGAGTTACGTATCGTTATATGTCTTCCTCCTCCTCCTCCTCATCTACTTCCTCGTCAAGTTTGAGACGATGTCAATCTCCCCTTCTGTCCACCGCCATGAATTCAGCATCTATGGGGACACCAACGCAGTCGCCATCACCGGCCAAGCGCTCACTCTCAGTAAACCGGAGTCGACCAGCCAATCCTCGGCTTAAACCTTCGTACGTGGGAGGTGGAAATGTTGGTGGCACTGGTACGCCTACGGCTCAGAAGATGCTTTTCACTTCAACCAGGAGTTTATCGGTTTCGTTTCAGGGTGAGTCATTCTCGATCCAGGTTAGCAAGGAGAAACCAGCCCCTTCGCCAAATTTAAGGAAAATTACGCCGGAGAGGAGGAAGGCCACAACCCCCGGCAAAGGAAGAAGCGGATGTTCCGGCCAGACTGATAATTCAAGGTCTACGGATCAGCAGAGATGGCCAGGAACAATGCGGCCCTCGAATTGTATGGCTAGAAGTGTGGATTACACGGACGATACGAAAAAATTGGGAGGACCCAGGGACGTGGTTAAGTCACTGCAAAATTTGATGGTAGATGTTCAAGATTCTTTTTATGAGACGATGAATTCTGAAGAGTGCAACGGAGAAGACAAGAAGACTTCTGAGGTCGTTATTGAAAGGAACAAAGTTGGTGGATCTGAGTTTATTACTTCTGATAATGAAAGTGTGTCTTCTGGTTGTTCTTCCTGCGGAGGGGAACAAGGGCGACGAGGTTCCCGTGGAATGGTGGCGCCAGCAAGTTTCTGGCAAGAAGCTAACAATCGGTTGCGGCAACAGACGGACCCTGCATCCCCATCGTCAAGGAATTCTGGAAATAAAGCAATTGTTCCGCCTAAGAATCTCAGTCCAAAAGATTCAGGTGTTGATAGTCCCATAACATCTCCCAGAAAAATTATAAATAGCAGGGGACAAGTATCTCCTATTCGTGCGGCGGTTCGTTCTGCCTCAACAAGTAAGCTTGCCACACCATCCATACGGTCCCCCTGGAGAGGGATGAGCCCATCTCGAGTAAGAAATGGAGTGGCAGGTGGCCTGAACGATAGGCCGGGCAATGTGCCTTCTATTTTAAGTTTTGTTGTTGATGTCCGAAGAGGAAAGATAGGGGAGAGCCGAATTGTTGACGCACATTTACTAAGACTCTTCTATAACAAACTCTTGCAATGGCGATTTGTAAATGCCAGGGCAGATGCCACCCTCTCTGTTCAGAGATTGAATGCAGAGAAAAGCCTCTATAATGCATGGATAGCTACCTCTGAGCTACGAGAATCTGCTAGAGCCAAAAGAGCAGAGTTAATATTGCTGAAGCAACATATCAAGCTAATTTCCATCCTCAAGGAACAGATAACATATTTGGAAGAGTGGGCTCTTTTGGATCGGGGATACTCTAGTTCACTCTCAGGGGCTATTAAGGCCTTAAAGGCTAGCACTCTCCGCCTGCCTGTTGTTGGCGGGGCAAAGGCGGATGTGCTGAATGTGAAGGATGCCATTTGTTCCGCAATGGATGTGATGCAGGCAATGGGGTCGTCTATATGTTTGTTGTCACCCAAGGTTGGACACGTAAACTCGCTATTGTTTGAAGCTGCTAATTTGAGTTCAAAAGAGCTTGCTTTGCTGGAGGAGTGCAAAAAACTTTTGTCAATCATTGCAGCTCTGGAGGTTTCAGAGCGGAGTCTGAAAACACATATTTTACAGTTGAAAAGCTTGCCTCACCACGAATCCAAACAATGA 1908 0.478 MVTAVATTINPKTTTKGGPAHPSHRPTRTPLLTSESDNALTPRRPKLQRVTYRYMSSSSSSSSTSSSSLRRCQSPLLSTAMNSASMGTPTQSPSPAKRSLSVNRSRPANPRLKPSYVGGGNVGGTGTPTAQKMLFTSTRSLSVSFQGESFSIQVSKEKPAPSPNLRKITPERRKATTPGKGRSGCSGQTDNSRSTDQQRWPGTMRPSNCMARSVDYTDDTKKLGGPRDVVKSLQNLMVDVQDSFYETMNSEECNGEDKKTSEVVIERNKVGGSEFITSDNESVSSGCSSCGGEQGRRGSRGMVAPASFWQEANNRLRQQTDPASPSSRNSGNKAIVPPKNLSPKDSGVDSPITSPRKIINSRGQVSPIRAAVRSASTSKLATPSIRSPWRGMSPSRVRNGVAGGLNDRPGNVPSILSFVVDVRRGKIGESRIVDAHLLRLFYNKLLQWRFVNARADATLSVQRLNAEKSLYNAWIATSELRESARAKRAELILLKQHIKLISILKEQITYLEEWALLDRGYSSSLSGAIKALKASTLRLPVVGGAKADVLNVKDAICSAMDVMQAMGSSICLLSPKVGHVNSLLFEAANLSSKELALLEECKKLLSIIAALEVSERSLKTHILQLKSLPHHESKQ 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0805 635 MobiDBLite consensus disorder prediction 275 292 - -
Lele03g0805 635 MobiDBLite consensus disorder prediction 316 336 - -
Lele03g0805 635 MobiDBLite consensus disorder prediction 51 108 - -
Lele03g0805 635 MobiDBLite consensus disorder prediction 275 301 - -
Lele03g0805 635 MobiDBLite consensus disorder prediction 1 17 - -
Lele03g0805 635 MobiDBLite consensus disorder prediction 346 361 - -
Lele03g0805 635 MobiDBLite consensus disorder prediction 1 130 - -
Lele03g0805 635 MobiDBLite consensus disorder prediction 181 204 - -
Lele03g0805 635 MobiDBLite consensus disorder prediction 316 364 - -
Lele03g0805 635 MobiDBLite consensus disorder prediction 153 213 - -
Lele03g0805 635 MobiDBLite consensus disorder prediction 27 41 - -
Lele03g0805 635 Pfam QWRF family 282 599 IPR007573 -
Lele03g0805 635 PANTHER AUGMIN FAMILY MEMBER 35 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0805 Lele-ChrLele03 4720593 4724580 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0805 03 4720593 4724580 Lele25g0818 25 5264909 5267669 CCT
Lele03g0805 03 4720593 4724580 Lele26g0830 26 5326974 5330059 CCT
Lele03g0805 03 4720593 4724580 Lele27g1260 27 19419739 19423376 CCT
Lele03g0805 03 4720593 4724580 Lele28g0815 28 5238473 5241785 CCT
Lele03g0805 03 4720593 4724580 Lele03g0805 03 4720593 4724580 ECH
Lele01g0815 01 4720555 4731244 Lele03g0805 03 4720593 4724580 hybridization
Lele02g0786 02 4807814 4811707 Lele03g0805 03 4720593 4724580 hybridization