LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele03g0789	ATGCTCTTCCACGAAGAAGAAGAAGCGGTCCACTTCCCATGTCCGCTTCTCACGGCTGGGGACATAGAGGAGTTGTTGTCCCTCATCCAATCAGGAGACGAAGAAGATCACACGACCAGCCCAAGCTCCGGTTCGCAAGGGTCGAGCCGGGAGGTATACTCGAATGACGAGAGAAAGCGCAGGCGGATGCAGTCGAACCGGGAGTCGGCCCGACGGTCCCGCTGGAGAAAGAAGAGACATTTAGAGGACCTCAACAGCCAAGTGAACCGCTTCTCAGTTGAAAACAAAGAGCTCAAAAACCGCCTAGGGCTCGCCATGCATCAACTCCGTCTAGTTTGCTTAGAGAATGAACTCCTGAGAACCGAATCCGTGGCCCTCTTGGCCAGAATTTCTGATCTACAATTGATTTTAGGTTCCATGCATTCCCAATAG	432	0.5255	MLFHEEEEAVHFPCPLLTAGDIEELLSLIQSGDEEDHTTSPSSGSQGSSREVYSNDERKRRRMQSNRESARRSRWRKKRHLEDLNSQVNRFSVENKELKNRLGLAMHQLRLVCLENELLRTESVALLARISDLQLILGSMHSQ	143

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele03g0789	143	Gene3D	-	56	110	-	-
	Lele03g0789	143	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	56	102	IPR004827	GO:0003700\|GO:0006355
	Lele03g0789	143	ProSitePatterns	Basic-leucine zipper (bZIP) domain signature.	61	76	IPR004827	GO:0003700\|GO:0006355
	Lele03g0789	143	MobiDBLite	consensus disorder prediction	32	51	-	-
	Lele03g0789	143	FunFam	BZIP transcription factor	56	107	-	-
	Lele03g0789	143	PANTHER	BZIP TRANSCRIPTION FACTOR 44	38	140	-	-
	Lele03g0789	143	SUPERFAMILY	Leucine zipper domain	58	108	IPR046347	GO:0003700\|GO:0006355
	Lele03g0789	143	MobiDBLite	consensus disorder prediction	31	78	-	-
	Lele03g0789	143	MobiDBLite	consensus disorder prediction	52	70	-	-
	Lele03g0789	143	CDD	bZIP_plant_GBF1	59	110	IPR045314	GO:0003700\|GO:0006355
	Lele03g0789	143	Pfam	bZIP transcription factor	58	103	IPR004827	GO:0003700\|GO:0006355
	Lele03g0789	143	Coils	Coil	81	101	-	-
	Lele03g0789	143	SMART	brlzneu	54	118	IPR004827	GO:0003700\|GO:0006355

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele03g0789	Lele-ChrLele03	4619248	4619679	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele03g0789	56	133	bZIP Transcription Factor Family	AT4G37730	55.128	1.59e-19	80.5

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Lele03g0789		bZIP_1	2.1e-10	CL0018