Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0780 ATGGGGAGAGCTCCTTGCTGCGACAAAGCGAACGTGAAGAGAGGCCCTTGGTCCCCAGAAGAAGATGCCAAGCTCAAGTCCTATATCGAACAACACGGCACCGGCGGTAACTGGATCGCTTTGCCCCAAAAGATCGGGCTAAAGAGATGCGGCAAGAGTTGCCGTCTAAGGTGGTTGAACTATCTTCGCCCCAATATCAAGCACGGGGGTTTCTCCGAAGAAGAAGACAATATCATATGCAGCCTCTACGTTAGCATTGGAAGCAGGTGGTCGGTGATTGCTGCTCAATTGCCAGGAAGAACAGATAACGATATAAAGAACTACTGGAACACGAGGTTGAAGAAGAAGCTTCTGGGAAAACACCGTAAAGAACAACAGGCACGTGGTAGGGACAAGAGTAAGCAAGGAGCGGATAAGAGTATTGTTGGGAATTCATGGTTCCTTCCCGAAAATATTAGTACTGGTCAGCTTCAGGCTCAACAGCACCCGTATTGGACTCACCACAAGATGATGTCTCTGCTACCACCCTTGCCATACTACCAAGTCCCAGGTTTCAACGACCAAGATTCCATTAGAAAACTGCTTATCAAGCTCGGAGGAACGTTTTCCGACCAGCCTGAAGAGTTCAATTTTCAATTACCAGATGCGACTCCCTCTGTACAGTCACCAATTTATCAAGTTTCTTCTTCTGCTTCTGCAAGCGCTATGAACAATAACCAACTACAATTCCCTCAACTCCATTACCACTCTGGACTTAACAACTTGGTGCAGGGAAGCAGCGCTTTCACCCAAGCACATGAGGAAATGTCGGTATCTTATCCACCTAATAACCTAGATGGGCTGGAATACTTGATCAATCATGATCATAAGATAGACCTTACCAGCTCGTGTGACAACAACACCGTAGTTTGTCCTCTAATTTCTTCCGATTATGAATGTATGCCACCATATCAGGAATTTGCTTTTCAGGAGTTGAGGTATCCAGGCGACCACTAG 996 0.4649 MGRAPCCDKANVKRGPWSPEEDAKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICSLYVSIGSRWSVIAAQLPGRTDNDIKNYWNTRLKKKLLGKHRKEQQARGRDKSKQGADKSIVGNSWFLPENISTGQLQAQQHPYWTHHKMMSLLPPLPYYQVPGFNDQDSIRKLLIKLGGTFSDQPEEFNFQLPDATPSVQSPIYQVSSSASASAMNNNQLQFPQLHYHSGLNNLVQGSSAFTQAHEEMSVSYPPNNLDGLEYLINHDHKIDLTSSCDNNTVVCPLISSDYECMPPYQEFAFQELRYPGDH 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0780 331 CDD SANT 71 113 IPR001005 -
Lele03g0780 331 PANTHER OS09G0431300 PROTEIN 1 260 - -
Lele03g0780 331 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Lele03g0780 331 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Lele03g0780 331 CDD SANT 16 62 IPR001005 -
Lele03g0780 331 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Lele03g0780 331 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Lele03g0780 331 SMART sant 13 64 IPR001005 -
Lele03g0780 331 SMART sant 67 115 IPR001005 -
Lele03g0780 331 FunFam Transcription factor RAX3 70 142 - -
Lele03g0780 331 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Lele03g0780 331 FunFam Transcription factor RAX3 7 68 - -
Lele03g0780 331 Gene3D - 7 68 - -
Lele03g0780 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Lele03g0780 331 Gene3D - 70 141 - -
Lele03g0780 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0780 Lele-ChrLele03 4561630 4562846 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0780 1 208 MYB Transcription Factor Family AT3G49690 64.115 2.14e-86 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele03g0780 Myb_DNA-binding 1.7e-14 CL0123