Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0778 ATGGAGGAATATAGTAACCAGGCGAGCGAAAGCACAGGTTCAAGGCCTAATTTCTTGAACTCGTTCGCTACAGTTGGAGGTTCAAGTGTGGGAAACCATCATCAATCGCCGAGCACTAACTTTCATCTTCAATCAGGTGGATCGGAGTTCTATCAATCTGTGAAAACTGAAGCCAACACCTCCATTAATCACTCTCAGATTTTCCACTATCCTTTGACCAGGCAAAGCATTCAGACTCGTGAAGGAAGCCAAACCTCTGACGAAGTTGAATCTCTTAAAGCTAAAATCATTGCTCATCCTCACTATTCCAACCTCTTGGAAGCTTACATGAACTGCCACAAGGTAGGAGCTCCGCCGGAAGTGGTGGCGCGTCTGACAACGGCAAGGCAAGAGTTCGAGGCCCGACAGCGATCTTCGGTCAGATCCAGGGAAACTTGCAAGGACCCAGAACTTGACCGATTTATGGAAGCTTACTATGACATGCTCGTGAAATACGGGGAGGAATTAACAAGGCCAGTTCAAGAGGCAATGGATTTCATACACAACATCGAAGCTCAGCTCAACATGCTTTGTAACGGACCTGTGCGCATCTTCCCTGAAGATAAGGGCGATGGCGTGGATTCATCTGAAGAAGATCAAGATAACAGTGGAGGAGAAGCAGAAATGGCCGGAATTGATCCTCGAGCCGAAGATCGCGAGCTTAAGAGCTACTTGCTTAGAAAGTATAGTGGATACTTAGGTAGCCTGAAGCAAGAACTTTCAAAGAAAAAGAAGAAAGGAAAACTGCCTAAAGATGCAAGGCAAAAGCTTCTTAACTGGTGGGAATTACACTATAAATGGCCCTATCCTTCGAAGGTGGCATTGGCAGAATCAACAGGGTTGGACCAGAAGCAAATAAACAACTGGTTCATAAATCAAAGGAAACGGCACTGGAAGCCATCAGAAGACATGCAATTTATGGTGATGGAAGGCCTTCACCAACAGAATCCGGCTCTCTATATGGACGCTCACTACATGGCTGATGCTCACTATCGTCTAGGACCATGA 1047 0.4604 MEEYSNQASESTGSRPNFLNSFATVGGSSVGNHHQSPSTNFHLQSGGSEFYQSVKTEANTSINHSQIFHYPLTRQSIQTREGSQTSDEVESLKAKIIAHPHYSNLLEAYMNCHKVGAPPEVVARLTTARQEFEARQRSSVRSRETCKDPELDRFMEAYYDMLVKYGEELTRPVQEAMDFIHNIEAQLNMLCNGPVRIFPEDKGDGVDSSEEDQDNSGGEAEMAGIDPRAEDRELKSYLLRKYSGYLGSLKQELSKKKKKGKLPKDARQKLLNWWELHYKWPYPSKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMEGLHQQNPALYMDAHYMADAHYRLGP 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0778 348 CDD homeodomain 265 314 IPR001356 GO:0003677
Lele03g0778 348 SMART HOX_1 255 317 IPR001356 GO:0003677
Lele03g0778 348 ProSiteProfiles ELK domain profile. 233 253 IPR005539 GO:0003677
Lele03g0778 348 SUPERFAMILY Homeodomain-like 254 322 IPR009057 -
Lele03g0778 348 SMART KNOX1_2 90 134 IPR005540 GO:0003677|GO:0005634
Lele03g0778 348 MobiDBLite consensus disorder prediction 1 20 - -
Lele03g0778 348 Pfam Homeobox KN domain 273 309 IPR008422 GO:0003677|GO:0006355
Lele03g0778 348 ProSitePatterns 'Homeobox' domain signature. 288 311 IPR017970 GO:0000981|GO:0006355
Lele03g0778 348 Gene3D - 258 317 - -
Lele03g0778 348 Pfam ELK domain 233 254 IPR005539 GO:0003677
Lele03g0778 348 SMART KNOX2_2 141 192 IPR005541 GO:0003677|GO:0005634
Lele03g0778 348 MobiDBLite consensus disorder prediction 201 226 - -
Lele03g0778 348 Pfam KNOX2 domain 145 191 IPR005541 GO:0003677|GO:0005634
Lele03g0778 348 Pfam KNOX1 domain 92 133 IPR005540 GO:0003677|GO:0005634
Lele03g0778 348 SMART ELK_2 233 254 IPR005539 GO:0003677
Lele03g0778 348 ProSiteProfiles 'Homeobox' domain profile. 253 313 IPR001356 GO:0003677
Lele03g0778 348 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 67 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0778 Lele-ChrLele03 4548279 4550935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0778 53 348 Homeobox Transcription Factor Family AT4G08150 67.314 3.90e-135 389