Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0777 ATGATCCGAGAACCAACCCCCTTCGTCCTCCCTCATCTTCAACTTCCTCCTTGGCTATCTGATAATTCCCCCGTAGCCGCCCCACCTTCCCCCTCCTCATTCCCCGTCCCAATCAACACCGATGCCGGCGCCGGAGACTCCTCCGTCCTACTCCTCCACCCTCTTCTTTCCAACGATTGTACCCTCCAGGAACTGCACTCTCTCGCTCGCGACTTCGACGTGCCCGTTGATGCTTTCTCCAACGATCAGTTCCGCATGTTCGAGTTCAAGATCCGCAAGTGTCCACGTGGCGGCAGGTCTCATGACTGGACGCGCTGTCCCTTTGCCCATCCCGGCGAGAAGGCTCGCCGCAGGGACCCTCGAAAATTCCCCTACTCCGCCAACCCTTGCCCTGACTTCCGCCATGCAAATTGCAACAGAGGTGACTCCTGCGATTTCGCTCACGGAGTCTTCGAATGCTGGCTCCATCCTTCTCGCTATAGAACTCAGCTCTGCAAAGATGGCACCAATTGTCGCCGTCGAGTCTGTTTCTTTGCCCACACTCCCGATCAATTGCGTGTCCTCACTCGCGGCTCCACCGAAGCATCAGTCAGGTCGCCGATTCGTCGCTCTCTGGATTCATCGAGGAGCAGCTCTTCATTTATCTCGTCGCCAACTTCAGTCCTCACATCATCGCTACCTGACGGCTCACCCGTGTCGCCAAGCAATTCCCAATATGGCGGTAACACTTACAATGCGATGAGTGAAATAGTAACTTCAATGCACAATATTCAGCTTGATTCAAACCGGATGGTTTCTGGTTTTGGTTCTTCCCGTGGATCGATTCTCCGACCTGGGTTTTCCAGCCTTCAGTCGACAACAACGTCGGCAAGAACTGATAAGTCCGGACCCGGTTCAGCGGACCTCTGGGATAGTAGCCACGAAGAAGAGACTCCCATGGAGAGGGTGGAATCAGGAAGAGACCTCAGGGCCAAAATCTATGCCAAATTCAGCAATGGAAACTCATACGGGCGAAGCGACGCCCCACTATCGGCTCCTGATTTTGGATGGGTCTCCGAACTGGTGAAGTGA 1071 0.5462 MIREPTPFVLPHLQLPPWLSDNSPVAAPPSPSSFPVPINTDAGAGDSSVLLLHPLLSNDCTLQELHSLARDFDVPVDAFSNDQFRMFEFKIRKCPRGGRSHDWTRCPFAHPGEKARRRDPRKFPYSANPCPDFRHANCNRGDSCDFAHGVFECWLHPSRYRTQLCKDGTNCRRRVCFFAHTPDQLRVLTRGSTEASVRSPIRRSLDSSRSSSSFISSPTSVLTSSLPDGSPVSPSNSQYGGNTYNAMSEIVTSMHNIQLDSNRMVSGFGSSRGSILRPGFSSLQSTTTSARTDKSGPGSADLWDSSHEEETPMERVESGRDLRAKIYAKFSNGNSYGRSDAPLSAPDFGWVSELVK 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0777 356 MobiDBLite consensus disorder prediction 277 295 - -
Lele03g0777 356 Gene3D - 125 187 - -
Lele03g0777 356 PANTHER UNKEMPT FAMILY MEMBER 75 356 IPR045234 -
Lele03g0777 356 ProSiteProfiles Zinc finger C3H1-type profile. 124 151 IPR000571 GO:0046872
Lele03g0777 356 MobiDBLite consensus disorder prediction 277 318 - -
Lele03g0777 356 SMART c3hfinal6 124 150 IPR000571 GO:0046872
Lele03g0777 356 SMART c3hfinal6 159 182 IPR000571 GO:0046872
Lele03g0777 356 MobiDBLite consensus disorder prediction 303 318 - -
Lele03g0777 356 MobiDBLite consensus disorder prediction 191 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0777 Lele-ChrLele03 4536784 4537854 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0777 73 239 C2H2 Transcription Factor Family AT5G12850 54.491 4.35e-53 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lele03g0777 None None None