Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele03g0765 | ATGTCGTCTTCTTCATTGCACGATGCTGACTTCGCAGCCGTATCCTTTCGATTCCTGGGTGATGATAATTCTATATGTCTTTTACTAAGCTCACATCGTCCCTTTTTCCCTTTTGTTCTTGGGAGGGGGCGAGATAAGACTTACACCGAAAGCTTATGCTGGTTAAGGCACCCGTTTGATTCGTCTAAATGGGGACGCATTTGTCAATTCCTCATCTCTTCTGGTATTTTGGATAAAAGATGCATTGTTGAGCCTCTGGAGGCTTCCAAGGATGATCTTCTAGTGGTACATTCAGAATCATACTTGAATAGCCTGAAGGAAAGTTCAAATGTTGCTAAGATAGTTGAGCACAGCTTTCATGGTCTAACTGAAGCAGAATTTGCAGTACTTGAGCCCATCATCAACAAATATCACAAATTCGAAGCTCTTCCCAATACATGCACTTCCATCATAACACACCGAATCCAGGCTCCGGCTAAAACTGTGTGGGGTTTCATTCGGAGCTTCGAGAATCCTCAGAAATACAAGCACTTCGTCAAGAGCTGCAACATGAAAGGTGACGGCGGCGTTGGCATCATCCGAGAAGTCACTGTGGTTTCCGGCCTCCCAGCTTCCACCAGCACCGAGAGGCTCGAGATCTTAGACGATGACAACCACATACTCAGCTTTAGGGTTGTGGGTGGCCAGCACCGACTCAGAGATTATTGCTCCGTCACGTCGGCGAATGAGTTTCAAACGGAAGACGGTAAGGTTTACACGATGGTGGTGGAGTCATCTATCGTGGACATACCGCCGGGGAATACTGCAGAAGATACGAAGATGTTCGTGGACACTGTGGTGAACCTCAACCTTCAGAAACTTGACCTCCTTGCCATCTCAACCCTCCATGCACAACATTAG | 900 | 0.4689 | MSSSSLHDADFAAVSFRFLGDDNSICLLLSSHRPFFPFVLGRGRDKTYTESLCWLRHPFDSSKWGRICQFLISSGILDKRCIVEPLEASKDDLLVVHSESYLNSLKESSNVAKIVEHSFHGLTEAEFAVLEPIINKYHKFEALPNTCTSIITHRIQAPAKTVWGFIRSFENPQKYKHFVKSCNMKGDGGVGIIREVTVVSGLPASTSTERLEILDDDNHILSFRVVGGQHRLRDYCSVTSANEFQTEDGKVYTMVVESSIVDIPPGNTAEDTKMFVDTVVNLNLQKLDLLAISTLHAQH | 299 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele03g0765 | 299 | PANTHER | - | 146 | 289 | - | - | |
| Lele03g0765 | 299 | Pfam | Polyketide cyclase / dehydrase and lipid transport | 153 | 268 | IPR019587 | - | |
| Lele03g0765 | 299 | SUPERFAMILY | Arginase/deacetylase | 48 | 118 | IPR023696 | - | |
| Lele03g0765 | 299 | CDD | PYR_PYL_RCAR_like | 147 | 287 | - | - | |
| Lele03g0765 | 299 | SUPERFAMILY | Bet v1-like | 147 | 288 | - | - | |
| Lele03g0765 | 299 | Gene3D | - | 112 | 299 | IPR023393 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele03g0765 | Lele-ChrLele03 | 4464878 | 4468351 | Dispersed/Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lele25g0773 | 25 | 4928598 | 4929164 | Lele03g0765 | 03 | 4464878 | 4468351 | CCT | |
| Lele27g1302 | 27 | 19756286 | 19756960 | Lele03g0765 | 03 | 4464878 | 4468351 | CCT | |
| Lele03g0765 | 03 | 4464878 | 4468351 | Lele25g0759 | 25 | 4814700 | 4817690 | CCT | |
| Lele03g0765 | 03 | 4464878 | 4468351 | Lele26g0766 | 26 | 4879254 | 4882157 | CCT | |
| Lele03g0765 | 03 | 4464878 | 4468351 | Lele27g1316 | 27 | 19869704 | 19872662 | CCT | |
| Lele03g0765 | 03 | 4464878 | 4468351 | Lele28g0754 | 28 | 4801227 | 4804138 | CCT | |
| Lele03g0765 | 03 | 4464878 | 4468351 | Lele03g0765 | 03 | 4464878 | 4468351 | ECH | |
| Lele01g0771 | 01 | 4470160 | 4470723 | Lele03g0765 | 03 | 4464878 | 4468351 | hybridization | |
| Lele02g0748 | 02 | 4505877 | 4506440 | Lele03g0765 | 03 | 4464878 | 4468351 | hybridization |