Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0761 ATGAGGCATCTACTCAGAAAACTTCATATCGGTGGTGGTATAAATGATCACCAGAGATTATCGCCTGAGTCTCGCCCAGTGCTCAGCCCCACTCCCAATCTTACTTTATCCTCTTCTGCTTTGTCCTCCCCTACAATGCCTACCGTCACTGCAACTGAATCGGTTGCTGATCGGACGGCTGATGATGTTACCGCTGGTGTTGGTGGCAACAAGGGAGGGGATTTCAATCTCATGGAGGAGGAGTTTCAGATGCAGTTGGCTTTGGCAATTAGTGCTTCTGATTCTGATGTCCGCAAGGATCCCGATTATGTTCAGATCGATGCTGCGAAGCAGATGAGCCTCGGGTGTCAAACTCCCGTCACTGACACTGACGCCCTTGTCCAGTTTCAATCTCTTCGTTATTGGAACTACAGTGTCATTGATCACGAAGAGAAAGTGATGGATGGGTTTTATGATGTTTATGGCATCACCTCAAATTCAGCTGAACGAGGAAGGATGCCATTGTTGGTTGATCTGCAAACTACATCCATCTCAGGAAATCTTGATTATGAAGTGATCTTGGTGAACCGCATGGTTGATAGTGAGCTGAAGCAGCTTGAGAAAAAGGCCTATATATTATCCAAGAACTCCCACTTTTCTGAACAAGGACTAATCTTAAGCGGCCTACTTCAGAAACTTTCTGACATTGTCGTTAATAGAATGGGGGGGCCGGTTGGTGATGCTGATGAAATTTTGAAAAGGTGGACCGTGAGGAGCTGTGAGTTAAGAAATTCCTTAAGAACCATTATTCTTCCCATTGGCTGTCTTGATGTAGGACTTTCACGTCACCGTGCCCTACTTTTCAAGGTACTTGCAGATAGAATTAATGTTCCCTGTATGCTGATCAAAGGGAGTTATTACACTGGAACTGATGATGGAGCCGTGAATTTGATCAAAGCTGATGATGGAAGTGAATTCATCATTGATCTGATGGGTGCTCCTGGGGAAGGTACAGAATGGGAGATTCAATGGGAGGATCTTCAAATTGGTGAGCGCATTGGTATTGGTTCTTATGGTGAGGTCTATCATGCTGACTTGAAAGGCACTGAAGTTGCTGTGAAGAAGTTTCTAGACCAAGATTTCTCTGGCGATGCATTGACTCAGTTTAAATCTGAAGTTGAGATAATGTTGAGACTGCGGCATCCTAATGTTGTGCTCTTCATGGGAGCAATTACTCGTCCCCCACATTTCTCTATCTTGACGGAGTTTCTTCCTAGAGGAAGTTTATATAGGCTATTACATCGACCCAATTTTCAACTTGAAGAAAAGAGGCGGTTGCGTATGGCTTTTGATGTGGCTAAGGGAATGAATTACTTGCACACGAGCCATCCTCCCATTGTCCATCGAGATTTAAAGTCTCCGAATCTTCTTGTTGACAAACATTGGGTTGTTAAGGTCTGTGATTTTGGCTTGTCACGCATGAAGCACCATACCTTTTTGTCTTCAAAGTCTACTGCTGGAACGCCTGAGTGGATGGCTCCAGAAGTCTTAAGAAATGAGCCAGCCAATGAGAAGTGTGATGTATATAGTTTTGGTGTGATTTTGTGGGAGTTGGTTACCACAAAGATCCCATGGAAGGGGTTGAACCCAATGCAGGTTGTTGGAGCTGTTGGGTTTCAAAATAGACGGCTTGAAATTCCAGAAGATATTGATCCAGTAGTGGCACAAATTATATGTGATTGCTGGCAAACGGAGCCACACTTGCGACCATCATTCTCACAGATCATGTCTCGTCTCCGCCACCTTCGCTGCCTGGTTGTCAGAACAACAGAACCAACTGAAAATTAA 1827 0.445 MRHLLRKLHIGGGINDHQRLSPESRPVLSPTPNLTLSSSALSSPTMPTVTATESVADRTADDVTAGVGGNKGGDFNLMEEEFQMQLALAISASDSDVRKDPDYVQIDAAKQMSLGCQTPVTDTDALVQFQSLRYWNYSVIDHEEKVMDGFYDVYGITSNSAERGRMPLLVDLQTTSISGNLDYEVILVNRMVDSELKQLEKKAYILSKNSHFSEQGLILSGLLQKLSDIVVNRMGGPVGDADEILKRWTVRSCELRNSLRTIILPIGCLDVGLSRHRALLFKVLADRINVPCMLIKGSYYTGTDDGAVNLIKADDGSEFIIDLMGAPGEGTEWEIQWEDLQIGERIGIGSYGEVYHADLKGTEVAVKKFLDQDFSGDALTQFKSEVEIMLRLRHPNVVLFMGAITRPPHFSILTEFLPRGSLYRLLHRPNFQLEEKRRLRMAFDVAKGMNYLHTSHPPIVHRDLKSPNLLVDKHWVVKVCDFGLSRMKHHTFLSSKSTAGTPEWMAPEVLRNEPANEKCDVYSFGVILWELVTTKIPWKGLNPMQVVGAVGFQNRRLEIPEDIDPVVAQIICDCWQTEPHLRPSFSQIMSRLRHLRCLVVRTTEPTEN 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0761 608 MobiDBLite consensus disorder prediction 22 57 - -
Lele03g0761 608 SMART serkin_6 340 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g0761 608 Gene3D Phosphorylase Kinase; domain 1 333 417 - -
Lele03g0761 608 PRINTS Tyrosine kinase catalytic domain signature 453 471 IPR001245 GO:0004672|GO:0006468
Lele03g0761 608 PRINTS Tyrosine kinase catalytic domain signature 519 541 IPR001245 GO:0004672|GO:0006468
Lele03g0761 608 PRINTS Tyrosine kinase catalytic domain signature 414 427 IPR001245 GO:0004672|GO:0006468
Lele03g0761 608 PRINTS Tyrosine kinase catalytic domain signature 500 510 IPR001245 GO:0004672|GO:0006468
Lele03g0761 608 PRINTS Tyrosine kinase catalytic domain signature 563 585 IPR001245 GO:0004672|GO:0006468
Lele03g0761 608 SUPERFAMILY Protein kinase-like (PK-like) 330 592 IPR011009 -
Lele03g0761 608 Gene3D Transferase(Phosphotransferase) domain 1 419 600 - -
Lele03g0761 608 CDD STKc_MAP3K-like 346 592 - -
Lele03g0761 608 FunFam Serine/threonine-protein kinase isoform 1 331 418 - -
Lele03g0761 608 Pfam Protein tyrosine and serine/threonine kinase 340 592 IPR001245 GO:0004672|GO:0006468
Lele03g0761 608 Pfam Ethylene-responsive protein kinase Le-CTR1 128 329 - -
Lele03g0761 608 ProSitePatterns Protein kinases ATP-binding region signature. 346 368 IPR017441 GO:0005524
Lele03g0761 608 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Lele03g0761 608 ProSiteProfiles Protein kinase domain profile. 340 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g0761 608 MobiDBLite consensus disorder prediction 13 67 - -
Lele03g0761 608 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 99 601 - -
Lele03g0761 608 FunFam Serine/threonine-protein kinase CTR1 419 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0761 Lele-ChrLele03 4445601 4452749 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0761 328 600 MAP Kinase Kinase Kinase AT5G11850 86.081 2.54e-174 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lele03g0761 PK_Tyr_Ser-Thr 1.4e-65 CL0016