LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele03g0761	ATGAGGCATCTACTCAGAAAACTTCATATCGGTGGTGGTATAAATGATCACCAGAGATTATCGCCTGAGTCTCGCCCAGTGCTCAGCCCCACTCCCAATCTTACTTTATCCTCTTCTGCTTTGTCCTCCCCTACAATGCCTACCGTCACTGCAACTGAATCGGTTGCTGATCGGACGGCTGATGATGTTACCGCTGGTGTTGGTGGCAACAAGGGAGGGGATTTCAATCTCATGGAGGAGGAGTTTCAGATGCAGTTGGCTTTGGCAATTAGTGCTTCTGATTCTGATGTCCGCAAGGATCCCGATTATGTTCAGATCGATGCTGCGAAGCAGATGAGCCTCGGGTGTCAAACTCCCGTCACTGACACTGACGCCCTTGTCCAGTTTCAATCTCTTCGTTATTGGAACTACAGTGTCATTGATCACGAAGAGAAAGTGATGGATGGGTTTTATGATGTTTATGGCATCACCTCAAATTCAGCTGAACGAGGAAGGATGCCATTGTTGGTTGATCTGCAAACTACATCCATCTCAGGAAATCTTGATTATGAAGTGATCTTGGTGAACCGCATGGTTGATAGTGAGCTGAAGCAGCTTGAGAAAAAGGCCTATATATTATCCAAGAACTCCCACTTTTCTGAACAAGGACTAATCTTAAGCGGCCTACTTCAGAAACTTTCTGACATTGTCGTTAATAGAATGGGGGGGCCGGTTGGTGATGCTGATGAAATTTTGAAAAGGTGGACCGTGAGGAGCTGTGAGTTAAGAAATTCCTTAAGAACCATTATTCTTCCCATTGGCTGTCTTGATGTAGGACTTTCACGTCACCGTGCCCTACTTTTCAAGGTACTTGCAGATAGAATTAATGTTCCCTGTATGCTGATCAAAGGGAGTTATTACACTGGAACTGATGATGGAGCCGTGAATTTGATCAAAGCTGATGATGGAAGTGAATTCATCATTGATCTGATGGGTGCTCCTGGGGAAGGTACAGAATGGGAGATTCAATGGGAGGATCTTCAAATTGGTGAGCGCATTGGTATTGGTTCTTATGGTGAGGTCTATCATGCTGACTTGAAAGGCACTGAAGTTGCTGTGAAGAAGTTTCTAGACCAAGATTTCTCTGGCGATGCATTGACTCAGTTTAAATCTGAAGTTGAGATAATGTTGAGACTGCGGCATCCTAATGTTGTGCTCTTCATGGGAGCAATTACTCGTCCCCCACATTTCTCTATCTTGACGGAGTTTCTTCCTAGAGGAAGTTTATATAGGCTATTACATCGACCCAATTTTCAACTTGAAGAAAAGAGGCGGTTGCGTATGGCTTTTGATGTGGCTAAGGGAATGAATTACTTGCACACGAGCCATCCTCCCATTGTCCATCGAGATTTAAAGTCTCCGAATCTTCTTGTTGACAAACATTGGGTTGTTAAGGTCTGTGATTTTGGCTTGTCACGCATGAAGCACCATACCTTTTTGTCTTCAAAGTCTACTGCTGGAACGCCTGAGTGGATGGCTCCAGAAGTCTTAAGAAATGAGCCAGCCAATGAGAAGTGTGATGTATATAGTTTTGGTGTGATTTTGTGGGAGTTGGTTACCACAAAGATCCCATGGAAGGGGTTGAACCCAATGCAGGTTGTTGGAGCTGTTGGGTTTCAAAATAGACGGCTTGAAATTCCAGAAGATATTGATCCAGTAGTGGCACAAATTATATGTGATTGCTGGCAAACGGAGCCACACTTGCGACCATCATTCTCACAGATCATGTCTCGTCTCCGCCACCTTCGCTGCCTGGTTGTCAGAACAACAGAACCAACTGAAAATTAA	1827	0.445	MRHLLRKLHIGGGINDHQRLSPESRPVLSPTPNLTLSSSALSSPTMPTVTATESVADRTADDVTAGVGGNKGGDFNLMEEEFQMQLALAISASDSDVRKDPDYVQIDAAKQMSLGCQTPVTDTDALVQFQSLRYWNYSVIDHEEKVMDGFYDVYGITSNSAERGRMPLLVDLQTTSISGNLDYEVILVNRMVDSELKQLEKKAYILSKNSHFSEQGLILSGLLQKLSDIVVNRMGGPVGDADEILKRWTVRSCELRNSLRTIILPIGCLDVGLSRHRALLFKVLADRINVPCMLIKGSYYTGTDDGAVNLIKADDGSEFIIDLMGAPGEGTEWEIQWEDLQIGERIGIGSYGEVYHADLKGTEVAVKKFLDQDFSGDALTQFKSEVEIMLRLRHPNVVLFMGAITRPPHFSILTEFLPRGSLYRLLHRPNFQLEEKRRLRMAFDVAKGMNYLHTSHPPIVHRDLKSPNLLVDKHWVVKVCDFGLSRMKHHTFLSSKSTAGTPEWMAPEVLRNEPANEKCDVYSFGVILWELVTTKIPWKGLNPMQVVGAVGFQNRRLEIPEDIDPVVAQIICDCWQTEPHLRPSFSQIMSRLRHLRCLVVRTTEPTEN	608

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele03g0761	608	MobiDBLite	consensus disorder prediction	22	57	-	-
	Lele03g0761	608	SMART	serkin_6	340	598	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele03g0761	608	Gene3D	Phosphorylase Kinase; domain 1	333	417	-	-
	Lele03g0761	608	PRINTS	Tyrosine kinase catalytic domain signature	453	471	IPR001245	GO:0004672\|GO:0006468
	Lele03g0761	608	PRINTS	Tyrosine kinase catalytic domain signature	519	541	IPR001245	GO:0004672\|GO:0006468
	Lele03g0761	608	PRINTS	Tyrosine kinase catalytic domain signature	414	427	IPR001245	GO:0004672\|GO:0006468
	Lele03g0761	608	PRINTS	Tyrosine kinase catalytic domain signature	500	510	IPR001245	GO:0004672\|GO:0006468
	Lele03g0761	608	PRINTS	Tyrosine kinase catalytic domain signature	563	585	IPR001245	GO:0004672\|GO:0006468
	Lele03g0761	608	SUPERFAMILY	Protein kinase-like (PK-like)	330	592	IPR011009	-
	Lele03g0761	608	Gene3D	Transferase(Phosphotransferase) domain 1	419	600	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele03g0761	Lele-ChrLele03	4445601	4452749	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele03g0761	328	600	MAP Kinase Kinase Kinase	AT5G11850	86.081	2.54e-174	516

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL_CTR1-DRK-2	Lele03g0761		PK_Tyr_Ser-Thr	1.4e-65	CL0016

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