Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0749 ATGGAGGGAGTGGGAGTAAAAGTGGAAGAAACGGTGGTATGTGGAGCTGGTTCATCGTCTTCTCCTTCATCTTCTGCTTCAAGTCTTTCTCCCCGCCCCATGGAAGGGCTGCACGAGATGGGTCCTCCTCCATTTCTTATCAAGACCTTTGAAATGGTGGAAGACCCATCCACCGACTCTGTTGTTTCTTGGAGCCTTGCTCGTAACAGCTTCATTGTCTGGGACTCTCACAAGTTCTCCACCACCATTCTTCCTCGCTACTTCAAGCACAGTAACTTCTCCAGCTTCATTCGCCAGCTCAACACGTATGGATTTAGAAAAGTTGATACTGATCGATGGGAATTTGCAAACGAAGGGTTTTTGGGTGGACAGAAGCACTTATTGAAGACAATCAAGAGAAGAAGAAATGTGCCGCAGAGTGTGAAGCAAGAACGAGGGGTCGCTTGTGTTGAACTGGGCCAATACGGATTTGAAGGTGAGCCCAACAGGTTGAGAAGAGACAGGACGGTTATCATGGCTGAAATCGTGAAATTGAGACAGCAACAGCTGAATTCACGGGCACAACTGATTGCGATGGAGGAAAGATTACAGTCTACAGAGAAGAAACAGCAACAGATTCTCACTTTCCTCGCCAAATCACTGAACAACCCCACTTTCATCCAACAGTTTGGCCAGAGAAACTCCCAAAACAGAGAATTACTCGGAGTTGATATCAGGCGAAAGAGGAGACTAACTGCTAGCGCAAGTTTGGAGAATTTACAGGATGATACTGTGACGGTGGCAGTGCCCAGTGAACCATTGGTGGACTATTCAACAAATGAACAAGAAGAATTGGCAACAATAGAATCTGAGATAGAGACATTTTTCTCAGCTCCTTATGATAATGAATCAAGCAGTGACAAGAAAGAGCCAGCATCAAGTTCAATTCCTACAGCTAGCGGCAGCAATCTGGGTTCAGTGAGTGACGCAATATGGGAGGATTTGCTGAACGAAGACTTAGTTCATGGGAATCCAGAGGAGGAAATTATATTTATTGAGCAGTCCCAAACCGATTCTCCAGTGGAAGATTGGGTAGCAAAGTCTGATGAGTGGGCTGAAGTTCGGCCTCGGCAACTCCATTTGTCCATTCCCTGCTTCTTACTAGTGCAGGGAAAGGTGGTCGTTGCTGCAGAGGCCATCACATACTGCTGTTTTATCTGTATCCTTTATGAATCAACCTAG 1221 0.4603 MEGVGVKVEETVVCGAGSSSSPSSSASSLSPRPMEGLHEMGPPPFLIKTFEMVEDPSTDSVVSWSLARNSFIVWDSHKFSTTILPRYFKHSNFSSFIRQLNTYGFRKVDTDRWEFANEGFLGGQKHLLKTIKRRRNVPQSVKQERGVACVELGQYGFEGEPNRLRRDRTVIMAEIVKLRQQQLNSRAQLIAMEERLQSTEKKQQQILTFLAKSLNNPTFIQQFGQRNSQNRELLGVDIRRKRRLTASASLENLQDDTVTVAVPSEPLVDYSTNEQEELATIESEIETFFSAPYDNESSSDKKEPASSSIPTASGSNLGSVSDAIWEDLLNEDLVHGNPEEEIIFIEQSQTDSPVEDWVAKSDEWAEVRPRQLHLSIPCFLLVQGKVVVAAEAITYCCFICILYEST 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0749 406 SMART hsfneu3 41 134 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele03g0749 406 MobiDBLite consensus disorder prediction 15 31 - -
Lele03g0749 406 FunFam Heat shock transcription factor 1 38 135 - -
Lele03g0749 406 ProSitePatterns HSF-type DNA-binding domain signature. 84 108 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele03g0749 406 SUPERFAMILY "Winged helix" DNA-binding domain 41 134 IPR036390 -
Lele03g0749 406 MobiDBLite consensus disorder prediction 15 35 - -
Lele03g0749 406 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 31 274 IPR027725 -
Lele03g0749 406 MobiDBLite consensus disorder prediction 292 314 - -
Lele03g0749 406 PRINTS Heat shock factor (HSF) domain signature 96 108 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele03g0749 406 PRINTS Heat shock factor (HSF) domain signature 83 95 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele03g0749 406 PRINTS Heat shock factor (HSF) domain signature 45 68 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele03g0749 406 Pfam HSF-type DNA-binding 45 134 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele03g0749 406 Gene3D - 38 135 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0749 Lele-ChrLele03 4390955 4392709 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0749 31 364 HSF AT2G26150 52.679 2.43e-119 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lele03g0749 HSF_DNA-bind 2.9e-31 CL0123