Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0743 ATGGCGAGGCCCATATGGCACTGCCATTACCGACTTTACTTGATATTTCGATTACCCAAGACCTTAAGCATCGACCAATCTCAGTCTCTTCATTTACCCTCCCGAGGAATCTTCTCTGCTACGTCGCCTTCCTCAACTCCTCCAACATCGAAGATCCGAGGAGTTTGGGAAACCCTAAACCCACAACCTGCACTTTCTAACTTCCTACTCTCATCTGTCAAAGTAAGTAATGCATATTATGCTGTAAAAAATCGCTGGTTGATGTCTTTATCTTTCATTTGTACCTATCAGTTTGCAGTCATGGCTGGAGTGGCACCGGAGGGATCACAATTTGATGCTCGTCAATTTGATTCTAAGATGAATGAGTTGCTTGGAACCGATGGTGAAGACTTCTTTACTAGTTATGATGAAGTTTATGAAAGCTTTGATGCTATGGGATTGCAGGAGAACCTTCTTAGGGGTATTTATGCATATGGTTTTGAGAAGCCTTCTGCAATCCAGCAAAGGGGAATTGTACCTTTCTGCAAGGGTCTTGATGTAATTCAGCAAGCCCAATCTGGGACGGGAAAAACTGCAACTTTCTGCTCTGGTGTGTTGCAGCAGCTTGATTATAGCTTAGTTGAATGCCAGGCACTGGTACTTGCTCCCACTCGTGAACTTGCTCAACAAATTGAGAAGGTCATGCGAGCACTAGGTGATTATCTTGGAGTTAAGGTTCACGCTTGTGTGGGTGGGACCAGTGTTCGTGAAGATCAACGCATCCTCTCAAGTGGGGTCCATGTTGTTGTTGGTACCCCTGGTCGTGTTTTTGACATGCTGCGGAGACAATCTCTGCGCCCTGATTATATTAAAATGTTTGTGTTGGATGAGGCTGATGAGATGCTTTCTCGGGGTTTCAAGGATCAGATCTATGATATTTTTCAGCTGCTGCCACCAAAAATTCAGGTTGGCGTTTTCTCTGCCACTATGCCTCCTGAGGCCTTGGAGATCACAAGGAAGTTCATGAACAAACCTGTGAGGATTCTGGTAAAACGTGATGAGCTTACCCTAGAGGGGATCAAGCAATTTCATGTCAATGTTGATAAGGAGGAATGGAAGCTTGAGACCCTTTGTGATCTTTATGAGACCCTTGCAATCACCCAAAGTGTTATCTTTGTGAACACTAGGCGCAAGGTAGACTGGCTGACAGACAAGATGCGAAGCCGAGACCACACGGTTTCAGCCACCCATGGGGATATGGACCAGAACACAAGGGATATCATTATGCGTGAATTCCGTTCCGGTTCCTCCCGTGTGCTAATCACCACAGACCTTTTGGCCCGTGGTATTGATGTCCAGCAAGTCTCACTTGTGATCAATTACGATCTGCCAACTCAACCAGAGAACTATCTCCATCGTATCGGTCGTAGTGGTCGGTTTGGAAGAAAAGGTGTTGCTATCAATTTCGTGACGAGGGATGATGAAAGGATGCTGTTTGACATCCAGAGGTTTTACAACGTGGTGATTGAGGAGCTCCCAGCCAATGTTGCAGATCTTCTTTAG 1542 0.4559 MARPIWHCHYRLYLIFRLPKTLSIDQSQSLHLPSRGIFSATSPSSTPPTSKIRGVWETLNPQPALSNFLLSSVKVSNAYYAVKNRWLMSLSFICTYQFAVMAGVAPEGSQFDARQFDSKMNELLGTDGEDFFTSYDEVYESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQRFYNVVIEELPANVADLL 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0743 513 FunFam Eukaryotic initiation factor 4A-III 348 513 - -
Lele03g0743 513 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 171 341 IPR014001 -
Lele03g0743 513 SMART helicmild6 393 474 IPR001650 -
Lele03g0743 513 Gene3D - 349 513 IPR027417 -
Lele03g0743 513 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 209 494 IPR027417 -
Lele03g0743 513 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 352 513 IPR001650 -
Lele03g0743 513 SMART ultradead3 159 356 IPR014001 -
Lele03g0743 513 Gene3D - 130 348 IPR027417 -
Lele03g0743 513 Pfam DEAD/DEAH box helicase 165 326 IPR011545 GO:0003676|GO:0005524
Lele03g0743 513 CDD SF2_C_DEAD 353 483 - -
Lele03g0743 513 FunFam Eukaryotic initiation factor 4A-II 128 347 - -
Lele03g0743 513 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 287 295 IPR000629 -
Lele03g0743 513 PANTHER RNA HELICASE 122 497 - -
Lele03g0743 513 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 140 168 IPR014014 GO:0003724
Lele03g0743 513 CDD DEADc_EIF4A 144 342 - -
Lele03g0743 513 Pfam Helicase conserved C-terminal domain 366 474 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0743 Lele-ChrLele03 4372289 4377552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0743 101 513 Eukaryotic Initiation Factors Gene Family AT1G72730 90.097 0.0 775