Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0739 ATGTCGACGGTATACGTGTTAGAACCGCCGACGAAAGGGAAGGTGGTGGTGAAAACAACCCATGGTCCGCTCGACATTGAGCTATGGCCCAAGGAAGCCCCCAAGGCTGTCAGGAACTTCGTGCAGCTCTGCCTTGAAGGTTACTACGTTAACACCATCTTTCATCGAATCATCAAGGACTTTCTTATCCAGGGTGGCGATCCCACTGCCACCGGCACAGGGGGTGAAAGTATTTATGGCGGTGTCTTCTCTGATGAATTTCATTCACGTTTAAGATTTAAGCATAGAGGATTAGTTGCAATGGCAAATTCTGGGTCACCACACTCCAATGGGAGTCAGTTTTTCATAACTCTGGATCGTTGCGATTGGCTTGATCGGAAGCATACAATTTTTGGAAAGGTGACGGGAGACACTGTATACAATCTTTTGAGATTGGGTGAACTTGAAACTGATAAGAATGATCGGCCTCTAGATCCCCCCAAAATAGTATCAATTGAGGTATTATGGAACCCATTTGATGATATTGTTCCAAGAACAACTCAACCTCAGATCCAAACTAGTACTGATACAGACAATAAAGATTCAAAGAAAAAAGCTGTAAAAAAACTGAACTTACTTTCATTTGGAGAAGAAGCTGAAGAAGGGGAAAAGGAGCTGGCATCTGTAAAACAAAAGATTAAGAGCAGTCATGATGTATTGAATGATCCTCGTCTTCTGAAGGAAGCAATTCCTAATAATGAACTGGGCTCAAAGTCGACAAGAGATGTGCAGTTATCTGTAAGGGATGCATTGAGCTCAAAGAAAGAAGAGTCTGAGAAAAAATCAGAAGATAATGACTTGGTCAACCTTGATGACAGTGATGATGATGATGAGGCAGAATTTGATGCTAGAATGCGCGGTCAAATACTTAAAAAACGCCAAGAGTTAGGGTATTTACCACCCAAGCCAAAGTTGCGAAATGGGTATAAGATACCTTGCTTGGTGTGGCAGTTGATGGTATTGTGCATTTTGGGAATGCTCACCGCCTTCTTGTGTTTTCAAGCAGGAAGCTCAAGTCCAAAGAGCCACAATTCATCAGCAATCAGGTCGAATGCTGCAAGTGTTGATGATGATCAGCGTAGGATGGAAAAATTGTCCGTGAAGAAAAAGGGAATAGGATCTGAAGCAAGGGCTGAACGAATGGCAAATGCAGATGTAGATTTACAGTTGTTCAATGAATCTGAGAAAAATAGACAGTTGCAGAAGCAGAAGAAACGCAGAGTTCAAGGACGTGAAGATGAGATTCTTTCTATCACTTCTGATAATGACCTTATTCTGTCCCTCTCCACTTTTGGGTTGGATTATGACCAGGTTCTAGCAAAAGTAGAGAAATTTAAGAAGGGTATATCAGAAAAGATCACATCCTCAACAGATGGATCTGGAGATGCGAAAGAGGAGGACTTGTCGAACTGGAAAGGAGGTAGCTTAAAATTTGCACCTGAATCCGGCAAGGATCGGATGTCACGTAACGATGACCCGAACGACTATGTTGTGGTAGACCCCCTTTTGGAGAAAGGTAAAGAGAAGTTCAATAGGATGCAAGCCAAACAGAAGAGACGAGAGCGAGAGTGGGCTGGCAAATCCCTTACTTGA 1632 0.4283 MSTVYVLEPPTKGKVVVKTTHGPLDIELWPKEAPKAVRNFVQLCLEGYYVNTIFHRIIKDFLIQGGDPTATGTGGESIYGGVFSDEFHSRLRFKHRGLVAMANSGSPHSNGSQFFITLDRCDWLDRKHTIFGKVTGDTVYNLLRLGELETDKNDRPLDPPKIVSIEVLWNPFDDIVPRTTQPQIQTSTDTDNKDSKKKAVKKLNLLSFGEEAEEGEKELASVKQKIKSSHDVLNDPRLLKEAIPNNELGSKSTRDVQLSVRDALSSKKEESEKKSEDNDLVNLDDSDDDDEAEFDARMRGQILKKRQELGYLPPKPKLRNGYKIPCLVWQLMVLCILGMLTAFLCFQAGSSSPKSHNSSAIRSNAASVDDDQRRMEKLSVKKKGIGSEARAERMANADVDLQLFNESEKNRQLQKQKKRRVQGREDEILSITSDNDLILSLSTFGLDYDQVLAKVEKFKKGISEKITSSTDGSGDAKEEDLSNWKGGSLKFAPESGKDRMSRNDDPNDYVVVDPLLEKGKEKFNRMQAKQKRREREWAGKSLT 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0739 543 MobiDBLite consensus disorder prediction 262 291 - -
Lele03g0739 543 MobiDBLite consensus disorder prediction 351 373 - -
Lele03g0739 543 FunFam Peptidyl-prolyl cis-trans isomerase CWC27 homolog 1 179 - -
Lele03g0739 543 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 49 66 IPR020892 GO:0003755|GO:0006457
Lele03g0739 543 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 11 201 IPR044666 -
Lele03g0739 543 SUPERFAMILY Cyclophilin-like 14 180 IPR029000 -
Lele03g0739 543 MobiDBLite consensus disorder prediction 262 280 - -
Lele03g0739 543 MobiDBLite consensus disorder prediction 465 543 - -
Lele03g0739 543 MobiDBLite consensus disorder prediction 514 543 - -
Lele03g0739 543 CDD cyclophilin_CeCYP16-like 8 179 - -
Lele03g0739 543 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 125 IPR002130 GO:0000413|GO:0003755
Lele03g0739 543 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 28 43 IPR002130 GO:0000413|GO:0003755
Lele03g0739 543 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 126 141 IPR002130 GO:0000413|GO:0003755
Lele03g0739 543 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 113 IPR002130 GO:0000413|GO:0003755
Lele03g0739 543 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 54 66 IPR002130 GO:0000413|GO:0003755
Lele03g0739 543 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 15 167 IPR002130 GO:0000413|GO:0003755
Lele03g0739 543 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 22 167 IPR002130 GO:0000413|GO:0003755
Lele03g0739 543 Gene3D - 2 182 IPR029000 -
Lele03g0739 543 MobiDBLite consensus disorder prediction 351 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0739 Lele-ChrLele03 4347764 4351727 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0739 9 172 U-box Gene Family AT5G67530 50.000 7.97e-45 165