Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0729 ATGACCATTGTTCTTTATGTCGACCCACACGATGACAATAACAGCATGATTCTTAATTTCGAAGGCGATCTTAATCCCTCGCTTCTTGATTCATCCAACCACCCACAGTCGTTTGCCGACTCTTCCTTCTCGGCGTTCCCCGAAATGGTGGATGACGATGCAGTAGCAGCCTTAATTGCCGACATTGGTCCATTATTAGATCATCTTATGATGTTTTCTGTTGGATCATCAGACAACAACGTTGAAGCGGGCCCTTCTGAGTTCCACCAGAAGGAAAATCTTTCAGTTCCTCATCAGAATCTGAGTGCAGCATCTTTTTCCGATAAAAGCATACACTGCTTCAAGAGTTTCCTAGTCCGACACTGCTTGAACCAAAATTCAATGGGCTACTCCATGATGCAAGATCCACTTTCTCCCTATTATGAAGCCCTCTGCTGTGGATTGGATTGGGCTGAAGACTCCAAGGAGGACTTCAGAGAAAAATCTGGTTCGGAACAAGAAGTGGAGGCCGGGGATGCCGTGGAAAGGACTTCAAACACTTGCCCTGCGGAACGGGGGAATGAAATGCAGAGGGAGGGGATCGAGAAGATGAAATTGAGCAATATGAGAGATTTATTTAGTCTACCAATTCATAAAGCAGCCAAGAAGTTGAAGTTATGTCCCACAGAAATGAAGAAAATATGTCGTAAACAAGGACTACAACGATGGCCTCACAGAAAGGTGAAAAGCATAGTGAGGCAAATATCGATATTGAGAAGGGCTTTAGAATCAGAAGATGGTGCCTCAACAAGGTCACAAACTGAAGCAGAAATTGAAAGACTTGAACAGGAAATGATTCGTCAGTGTGGTGGATTCCCCCCAACTTCATCCAATTTCGAATGA 882 0.4422 MTIVLYVDPHDDNNSMILNFEGDLNPSLLDSSNHPQSFADSSFSAFPEMVDDDAVAALIADIGPLLDHLMMFSVGSSDNNVEAGPSEFHQKENLSVPHQNLSAASFSDKSIHCFKSFLVRHCLNQNSMGYSMMQDPLSPYYEALCCGLDWAEDSKEDFREKSGSEQEVEAGDAVERTSNTCPAERGNEMQREGIEKMKLSNMRDLFSLPIHKAAKKLKLCPTEMKKICRKQGLQRWPHRKVKSIVRQISILRRALESEDGASTRSQTEAEIERLEQEMIRQCGGFPPTSSNFE 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0729 293 ProSiteProfiles RWP-RK domain profile. 184 264 IPR003035 -
Lele03g0729 293 Pfam RWP-RK domain 197 244 IPR003035 -
Lele03g0729 293 Coils Coil 257 277 - -
Lele03g0729 293 MobiDBLite consensus disorder prediction 160 186 - -
Lele03g0729 293 PANTHER PROTEIN RKD4 98 279 IPR044607 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0729 Lele-ChrLele03 4303102 4304561 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0729 195 261 NLP Transcription Factor Family AT4G24020 41.791 1.81e-13 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Lele03g0729 RWP-RK 8e-19 No_clan