Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0701 ATGGAATCGGAGAATTCGGTGAAACTGCAATTGGAGGAATTGCAGAAACATTTGGTGAAGAAGCTGAAGTTCGAGGACGCCGTCTTCTCTCTCAAATCCCTCCTTCAACAGAAATATCCATCCGCTTCTCCCTCTCTCCGCAAATCCTTTTATATGGCTGTATGCCGAGTTGCTACTGTATTGAAGACCAGGTATACGGCACCGGGTTTCTGGAATGCTGGGCTGGGGCTTTTTGAGCTGGCTGAATTGCTTGTATCTGATCCATCTGAGAAGGAACACTTGAAGGGTTGCATTTCTCAGGCGAGGGAAGAGTTGCATCTAGAGGATAATCCGCCACAAGCTTCACAACCAACTCAAAATCCTGGGAATGGAGGATATCTTTTTGAGGGACACCTTACTGTGGATCCAGAGCCACCTCAGCCTCAATGGCTGGTAGAGTCAAACCTCTTGACAACAGCTGCTACGCTATTTGCTGCTGAATCATCTCAAAGTTTAGCGGCAGACGATACTTCACGGGAAAATGCTGCAAATATGCTTCAGGATCTTCTGAATAGATTAGAAGATGCCGTGCCACTGATGCTGAGTGATGGTCCAGCACCTCCAAAAGTCCCTCCTGCTAGCAAAGAAGTTGTGGCAAAGCTTCCGGTCATTACTCTTACAGAGGAAATCCTAGCTAAGCTGGGGAAAGATGCAGATTGTGCAATTTGCAAGGAAAACTTGGCTCTAAATGATAAAATGCAGGAGTTGCCATGCAAGCACACATTCCACCCACCTTGTCTAAAGCCATGGCTGGACGAGCATAATTCATGTCCTATTTGTCGTTATGAGCTGCAGACTGATGACCATGCCTATGAGAGCTGGAAGGAACGTGAGAAGGAAGCAGAAGAAGAGAGAAAGGGTGCCGAAAATGCCATTCGTGGTGGCGAATATATGTATGTTTAG 942 0.4671 MESENSVKLQLEELQKHLVKKLKFEDAVFSLKSLLQQKYPSASPSLRKSFYMAVCRVATVLKTRYTAPGFWNAGLGLFELAELLVSDPSEKEHLKGCISQAREELHLEDNPPQASQPTQNPGNGGYLFEGHLTVDPEPPQPQWLVESNLLTTAATLFAAESSQSLAADDTSRENAANMLQDLLNRLEDAVPLMLSDGPAPPKVPPASKEVVAKLPVITLTEEILAKLGKDADCAICKENLALNDKMQELPCKHTFHPPCLKPWLDEHNSCPICRYELQTDDHAYESWKEREKEAEEERKGAENAIRGGEYMYV 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0701 313 FunFam E3 ubiquitin-protein ligase RNF181 195 280 - -
Lele03g0701 313 SMART ring_2 233 273 IPR001841 -
Lele03g0701 313 Pfam Ring finger domain 232 274 IPR001841 -
Lele03g0701 313 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 149 277 - -
Lele03g0701 313 MobiDBLite consensus disorder prediction 108 132 - -
Lele03g0701 313 ProSiteProfiles Zinc finger RING-type profile. 233 274 IPR001841 -
Lele03g0701 313 SUPERFAMILY RING/U-box 227 280 - -
Lele03g0701 313 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 199 280 IPR013083 -
Lele03g0701 313 Coils Coil 284 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0701 Lele-ChrLele03 4148396 4150538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0701 7 313 C3H Transcription Factor Family AT5G20910 65.472 2.44e-133 379