Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0692 ATGTATCGATTTAAACTTCAAACCAGTCCAATTCCAGCACTTCAAGCCACATGTGCTTTGAGCAATGATTACAGAATCATAGGTCGAGGAACCATGGTCGCAATGACTGAGGCTCGTTGGCCATTATTGAAGAAAGTTGTAGCCGTCACAGACAGAAATAGGACGCAGGAAGAAGCTCTAATGCTCTATCAAGACGAAACCACGGCTCGACCATATGTCATTCGTCCGGGGCGATTTCTTCCACGCTTTACTTCTGCGAAATCTGCTCTAACTGAACTTCTGTCGAAGATTTTATCATCGGTCAATGAGGAATGCCTTCGCTTTTGCGGCTATCTACCGACACCGTGGCGCCTTGGTCTTCTCCAGAAGTATATACCACTAGATACTTTCCTGACGACTCTATTGTTTCTCCATCTAAACTGTTTGTTTGTACGGTTGTCTCACTATGAGAGTACATATCTTGCAGAGTTACAGCACGAGGGTGCAAATGAAGTCATCTTACGCAAATGCATGCCACTGGGATATCTTAAACACATTGAGGTTGCCAAGAGATCAGATGTTGGCTGGTTGCCAGCTTGCTTGCTGCATCAACATTTGTATTCAACTGGCTTCACCAGTGTGCACGGGGACAAGCCATCTGCTGAGTATGCAAAGCTTAGGAGAGAATCCTTAGAAAGTGAATTTGGGCTTGCTCTTGGAACTTATGGCTCCAAAACTTTCTCCACTGTCTATCGGTTTGGCCCATTTTTGGCTTTGTACAGGGCAGCAATTATTTCATTTCATGTGTTCAGGCTAACATTTTGGCAGCTCTTTGTTCAAGACATAGAAAAGCGTGCAATTGAGTTTCGCAAAACTCTAATACGCTTGGGTCCCTTCTATGTTAAGCTTGGCCAGGCTTTGAGCACTAGGCCTGATATACTACCAACAGTATACTGCCAAGAACTTGCTAAGCTACAGGATCAAATACCCCCATTTTCAACTAAAGTTGCCATTAGATCTATAGAAACCCAGCTAGGTGCCCCTGTTTCTGAGATATTTAGTGACATTAGCCCAGAGCCTATTGCAGCAGCATCCTTAGGGCAAGTTTATAAAGCTCACCTGCATTCTGGAGAGCTGGTAGCTGTAAAAGTACAGAGGCCTGGTATGTCACTTTCACTGACCCTCGATGCCTTGTTGTTCCATATGATTGGTGGCCAACTAAAGCGATTTGCCAAGGCTCGTAGAGATCTTATTGTAGCAGTGAATGAGATAGTCAGGCACATGTTTGATGAAATTGATTATGTCCTAGAAGGAAAAAATGCTGAGCGTTTTGCTTCTCTTTACAGCCTCCAAGCAAGTGGTAATGAACATGGTTACAGAGCTGGAGGAATAAACAAAAGTGGACTCAAAGGAATGAAACGCATCAAAGTTCCAAAAATATATTGGGACTATACACGTACCACTGTGCTGACTATGGAGTGGCTAGATGGAATTAAGCTTACTGATGAAACACGCCTGAAGAATGCTTCTTTGAACAAAAGAGAACTCATTGACCAGGGATTGTCCTGCTCTTTGATGCAACTGCTTGAGGTTGGATATTTCCATGCTGATCCACATCCAGGAAACCTGGTGGCAACTGACGATGGATCACTGGCATATTTTGACTTTGGAATGATGGGGGATATTCCTCGGCATTACCAGATTGGACTTATTCAAATGCTTGTGCACTTTGTTAATCGTGATTCTCTGGGTTTGGCAAATGACTTTCTTTCTTTGGGATTTATTCCGGAAGGAGCTGATGTATATGCAGTTTCTGATGCTTTGAAAGCATCTTTTGCTGATCGAACCGGTCAATCACGAGATTTCCAGGGAGTTATGAACCAACTCTACGATGTTATGTATGAATTTAACTTCTCCCTCCCACCAGACTATGCTCTAGTGATAAGAGCATTGGGATCACTTGAGGGCACAGCAAAAATTCTGGATCCTGATTTTAAAGTCATTGAGAGCGCATATCCATTTGTCATTGGGAGACTGATTGCAGACCCGAGTCCTGATATGAGAAGAATTTTGAGGCAACTTCTCATTTGTAACAATGGTGCTATTAGGTGGAATCGACTAGAGCGCTTGATAGCAGCAATATCTGAGCAGGCTTCTGAGTCAACTGAAGACCCTAGTTCTGAGAAGTCTTCAAGTCCTTTGGGTTGGAAGTACTTTGACATGCATTCTGTTGTTGATGCCACTGAAGATCTTTTATTGTTCCTTCTATCAGACAAGGGTCTGAGAGTGCGCCTTTTCCTTCTTCGGGATATAATTGAAGCGGCTGATTTATTCCTGCAAGATGAAATCATCGATAATTTGTTAAAGGAGAGGCCTCTGGGCCAAAGCAGATTGCTATTTGAGGAGGAGCGTGCTGTTCTCAATAGGATTGGAAAAGGCTTTCAGTACTTTAATGATGTGATTAAGTTGGCGCCAGAGGAGTGGACCGCCATGCTTCTACGGATGGCAGTGAAACCTGATGTCCACAAATTTACTGTAGACATTATTGCAGCTCTTGTTTATCATTTTAACCACAGACTCCAAGATGCGTCTTGGCTTTATTTCTCAAAACTTCTCCACAAATGGAAGTAG 2610 0.4322 MYRFKLQTSPIPALQATCALSNDYRIIGRGTMVAMTEARWPLLKKVVAVTDRNRTQEEALMLYQDETTARPYVIRPGRFLPRFTSAKSALTELLSKILSSVNEECLRFCGYLPTPWRLGLLQKYIPLDTFLTTLLFLHLNCLFVRLSHYESTYLAELQHEGANEVILRKCMPLGYLKHIEVAKRSDVGWLPACLLHQHLYSTGFTSVHGDKPSAEYAKLRRESLESEFGLALGTYGSKTFSTVYRFGPFLALYRAAIISFHVFRLTFWQLFVQDIEKRAIEFRKTLIRLGPFYVKLGQALSTRPDILPTVYCQELAKLQDQIPPFSTKVAIRSIETQLGAPVSEIFSDISPEPIAAASLGQVYKAHLHSGELVAVKVQRPGMSLSLTLDALLFHMIGGQLKRFAKARRDLIVAVNEIVRHMFDEIDYVLEGKNAERFASLYSLQASGNEHGYRAGGINKSGLKGMKRIKVPKIYWDYTRTTVLTMEWLDGIKLTDETRLKNASLNKRELIDQGLSCSLMQLLEVGYFHADPHPGNLVATDDGSLAYFDFGMMGDIPRHYQIGLIQMLVHFVNRDSLGLANDFLSLGFIPEGADVYAVSDALKASFADRTGQSRDFQGVMNQLYDVMYEFNFSLPPDYALVIRALGSLEGTAKILDPDFKVIESAYPFVIGRLIADPSPDMRRILRQLLICNNGAIRWNRLERLIAAISEQASESTEDPSSEKSSSPLGWKYFDMHSVVDATEDLLLFLLSDKGLRVRLFLLRDIIEAADLFLQDEIIDNLLKERPLGQSRLLFEEERAVLNRIGKGFQYFNDVIKLAPEEWTAMLLRMAVKPDVHKFTVDIIAALVYHFNHRLQDASWLYFSKLLHKWK 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0692 869 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 222 853 - -
Lele03g0692 869 ProSiteProfiles Protein kinase domain profile. 348 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g0692 869 SUPERFAMILY Protein kinase-like (PK-like) 319 573 IPR011009 -
Lele03g0692 869 CDD ABC1_ADCK3-like 317 582 - -
Lele03g0692 869 Pfam ABC1 atypical kinase-like domain 317 579 IPR004147 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0692 Lele-ChrLele03 4089708 4098711 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0692 03 4089708 4098711 Lele25g0692 25 4368783 4369414 CCT
Lele03g0692 03 4089708 4098711 Lele26g0697 26 4444957 4445588 CCT
Lele03g0692 03 4089708 4098711 Lele27g1400 27 20313998 20314628 CCT
Lele03g0692 03 4089708 4098711 Lele28g0680 28 4357723 4359576 CCT
Lele03g0692 03 4089708 4098711 Lele03g0692 03 4089708 4098711 ECH
Lele01g0695 01 4080896 4088243 Lele03g0692 03 4089708 4098711 hybridization
Lele02g0681 02 4091531 4100425 Lele03g0692 03 4089708 4098711 hybridization