Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0678 ATGATCACTTCACCCATCTCCAAGACCCCTCGCAACAAAATGAGTCCCTTTCCCAAACAAACAATCATAGTACTTGCTTTCTTCATCTTCTTCACCCATCTTTTCCACTCACGTGCCTCTGAAGTCCCCCACCTTCACTGCAAAGCATGGCTCGTGCAATCAATTCCCACTGACATGCCCTACCTCTCCCGCGTTCCCGGCGCTCTCTCTACTGGGGATGTGCTCCGGTGGCTCGCGGCGAACTCTACTCGGCGACTCGACATAATTGCTCAGTACTGGCAGCTGGTGGCTTCTCCCAATGATCCTCGTTCCGGAGATTATGGCTACTCCGAAAGTGATATGCGTAAATTCGGTGCCCATGAAGGTGCTGCCGTTTATAAAGCCATAGATGCTGCTGCTGATCGTAATGTTAGAATCAGGTTACTGTCTCACTCGGGAGTATATCCAGACTACACCACAGAACCATCTAAACTTGCTTCAGGAAGACCAAATGTTAAGAATGTGACCTTGTTACTGGAAGATTGGTGGGGTTCGGGCATTGTTCATGCCAAAGTCTGGATATCAGATAAACGGGACGTATATATTGGATCCGCAAACAATGACTGGAAATCTCTTACTCAGGTTAAGGAAGTTGGAATCTATCTTACTGGTTGCCCAATAATAGCTGAAAGTGTTGAAGTCTACTTCAACAATTTATGGAAACTCGCATCTCTTAATTCCTTAGCTTATACAAAAACAGTATTTGATCAACAGTGGCAAGTTGAAAGAAAGGTTCCTTGCTGGTCTCATTTCATTGCCCGAAAAAAGAGATGCGAGTCTCCTCTTCCTGGGTATGTAAAGACTCCCCATGTTGCAGGATATCCTGTTCTTTCTGATCCCTATTTGTTTAAAGTTTCAATTGAGACTCCTGGAAGTAACCGTTCAACAGAGCTTCCCCAAGCTAGCTATCTCTCCTTTGCTCCTCCTGAGCTGTCATTTGGCAAGTATCAGGCTGATGAGCAGGCTTGGGTTGATACTATCAAATCTGTTGGAATGAACGAGACAGTTAGAATCAACACCATGGACTGGTTGGGCCAGTCACAATTTACTGACCAAACTGTTTACTGGTCATCCCTGTCCTCTGCGATATCAGAGGTTGTGTTTTCCAAGCATGCAACAGTAAAAATATTGGTGGCATATTGGAGTCACTTCATCAATAGCACAGATGTGTACCTGAAGTCTCTCCTCTTCTCCAACAATCTCTGCTCATCTTCAAAGTACAATGAGTGCTCTGGAAAAGTTGAGATCAAGTACTATGTGGTTCCAGGTTTCAATTCGACTGGGCCAGCCGTTAAGGACGGAGCCAGTACAGGAAATTCATATCCTGGTTTTACGAGGGTCAATCATGGAAAATATGCAGTTTCTGACGTACGAGCTCACATTGGAACTAGCAATCTCGTATGGGACTACTTTTATACCACATCAGGAGTCAGCTTTGGAGCACACAACCCTGCCATTGTTTCACAACTTCAGCAGATTTTTGATGCTGACTGGCATTCACCTTACTGTCTCCCTGTTGAAAAACTGGAACAACGCCTTTCTTCTTCATTCTAG 1593 0.4495 MITSPISKTPRNKMSPFPKQTIIVLAFFIFFTHLFHSRASEVPHLHCKAWLVQSIPTDMPYLSRVPGALSTGDVLRWLAANSTRRLDIIAQYWQLVASPNDPRSGDYGYSESDMRKFGAHEGAAVYKAIDAAADRNVRIRLLSHSGVYPDYTTEPSKLASGRPNVKNVTLLLEDWWGSGIVHAKVWISDKRDVYIGSANNDWKSLTQVKEVGIYLTGCPIIAESVEVYFNNLWKLASLNSLAYTKTVFDQQWQVERKVPCWSHFIARKKRCESPLPGYVKTPHVAGYPVLSDPYLFKVSIETPGSNRSTELPQASYLSFAPPELSFGKYQADEQAWVDTIKSVGMNETVRINTMDWLGQSQFTDQTVYWSSLSSAISEVVFSKHATVKILVAYWSHFINSTDVYLKSLLFSNNLCSSSKYNECSGKVEIKYYVVPGFNSTGPAVKDGASTGNSYPGFTRVNHGKYAVSDVRAHIGTSNLVWDYFYTTSGVSFGAHNPAIVSQLQQIFDADWHSPYCLPVEKLEQRLSSSF 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0678 530 Gene3D Endonuclease Chain A 70 237 - -
Lele03g0678 530 PANTHER PHOSPHOLIPASE D - RELATED 33 525 - -
Lele03g0678 530 CDD PLDc_vPLD3_4_5_like_1 51 218 - -
Lele03g0678 530 Pfam PLD-like domain 122 233 IPR025202 -
Lele03g0678 530 Gene3D Endonuclease Chain A 317 513 - -
Lele03g0678 530 SUPERFAMILY Phospholipase D/nuclease 333 525 - -
Lele03g0678 530 SUPERFAMILY Phospholipase D/nuclease 74 235 - -
Lele03g0678 530 CDD PLDc_vPLD3_4_5_like_2 316 512 - -
Lele03g0678 530 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 177 204 IPR001736 GO:0003824
Lele03g0678 530 SMART pld_4 177 204 IPR001736 GO:0003824
Lele03g0678 530 SMART pld_4 457 483 IPR001736 GO:0003824
Lele03g0678 530 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 457 483 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0678 Lele-ChrLele03 4023655 4027156 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0678 03 4023655 4027156 Lele25g0674 25 4256202 4258206 CCT
Lele03g0678 03 4023655 4027156 Lele26g0682 26 4349839 4351835 CCT
Lele03g0678 03 4023655 4027156 Lele27g1415 27 20425467 20427467 CCT
Lele03g0678 03 4023655 4027156 Lele28g0666 28 4258456 4263795 CCT
Lele03g0678 03 4023655 4027156 Lele03g0678 03 4023655 4027156 ECH
Lele01g0683 01 4016009 4024576 Lele03g0678 03 4023655 4027156 hybridization
Lele02g0671 02 4029613 4033130 Lele03g0678 03 4023655 4027156 hybridization