Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0676 ATGGAGGAGGAGAAAAATACAATGTTCGGCAAGTATGAAATAGGTAGGCTTCTGGGGAAAGGGACTTTCGCCAAGGTGTATCACGGCAAACAGATAGCCACCGGCGAGAGCGTGGCCATCAAGATCGTCAGCAAGGAGCAGGTAAGGAAGGAGGGCATGATGGAGCAGATCAAGCGCGAGATTTCCGTTATGCCATTGGTTCGTCACCCCAACGTGGTTAAGCTCAAGGAAGTGATGGCCACCAAGACCAAAATTTTTTTCGTCATGGAGTATGTCCGCGGCGGCGAGCTCTTCGTCAAGGTCGCCAGAGGCAAACTCAAGGAAGATGTCGCTCGCAAGAGTATCGCACTTGATCTCAAGCCCGAAAATTTATTGCTGGACGAGAACGAGAATCTCAAAATCTCCGACTTTGGCCTCTCGGCGCTGCCGGAACAGCTCCGTCAAGACGGCCTCCTCCACACCCAGTGTGGTACTCCGGCATATGTCGCCCCCGAAGTGTTGAGAAAGAAAGGCTATGATGGGTCCAAGGCTGATATATGGTCGTGCGGTGTCATTCTGTATGCGTTGCTCGCCGGTTTTCTTCCATTCCAGAACGAGAACCTCATCAGCATGTATAGCAAGGTTTTAAGAGCAGAATTCCAATATCCTCGTTGGTTTTCTGCGGAATCAAGGCTATTGATTTCGAAAATCCTCGTGGCTGACCCGGAAAGACGGGCTGCGATCCCCGCAATAATGCGGGTCCCATGGTTTATGAAAGGTTTGTCGAGGCCGTTCGCTTTTCAACTAGAGGAACCCGTTTTGGAGAAAGCCGATGATGATAAGCAGCTGCAGCAAGCAGAACTCGCGAACCCAAAATTGAAACCTTCATCACCCAAGTTTTTCAACGCGTTCGAATTCATTTCGTCCATGTCTTCTGGGTTTGATTTGTCCGGGATGTTCGAGAGCAAGAGGAAAACAAGGTCGATGTTCACATCCAAATGCTCGGCCACGGCGATCGTATCGAAGATTGAGACGGTGGCGAAAGGGCTGAGTTACAAGGTAAGGAATGAGAAGGGATTCAAGATCCGGCTGCAAGGGCCATCAGAGGGAAGGAAAGGGAAGCTGACCGTGACGGCGGAGGTGTTTGAGGTGGCACCAGAGGTAGCCGTAGTGGAGTTTTCAAAGAGCTCCGGCGATACCATGGAATATGCAAAGTTTTGCGAGGAAGACGTAAGGCCGGCGCTGAAAGACATAGTATGGACGTGGCAAGGTGACAGCACGTGCGAGGAGAAGCAAATTAATTCTGATATGGAATCAACATGCTTGGATACCTCTCTCAACCTCAACGTTGGCCCTCGAGACGCGCAAGTTATCACGGCTGAGGATTTGGTGCAAGAGTTGCATCGTTTAAGCAGTGAGAATCAGAAGCTAACAGAGAGACTTACTCACATGCGTGAGAACTGCAATCTTTTGAAAAAGCAATTGAGCCAAGTGATGATCAAGAACACCATCAATAATAGTCCTGAAAGGGATCCGCCAAAAACTAATCAATCAAAGAAGAGAAAGGCTGAGACTGATGCCTGCATCGATAACGTGATTAGTATTAGCGGCAACACCCAGTGCAGCGACGAAGATTCATCATTCAGAAGGCCAGCCGATAAGGTTTCCAGAGTTCTGGTGCGCACCCAAGCATCAGATACTGGCTTGTATGTGAGGGATGGATATCAATGGAGGAAATATGGTCAGAAGGTGACTCGAGATAACCCTTCTCCGAGAGCTTACTTCAGGTGCTCCTTTGCGCCAAGCTGCCCTGTGAAGAAGAAGGTGCAAAGAAGTGCAGAAGACCCGACAGTGTTGGTGGCAACCTACGAAGGAGAGCACAACCATGGACGACATGGATCTGAATTACCATCACTAACCTCGAATAACCAGAGCCAAAGTGATTCAGGATTAATAATGTCTGAAAATGGTGGAAAGTCAATGCAGCTGTGTTTGGTTCAACAAATGGCCACTTCTTTGACCAGAGATCCCAACTTTACCGCAGCACTCGCCACCGCCATCTCCGGAAGAATTTTAAACCTTGCTTCTAATTAA 2073 0.4896 MEEEKNTMFGKYEIGRLLGKGTFAKVYHGKQIATGESVAIKIVSKEQVRKEGMMEQIKREISVMPLVRHPNVVKLKEVMATKTKIFFVMEYVRGGELFVKVARGKLKEDVARKSIALDLKPENLLLDENENLKISDFGLSALPEQLRQDGLLHTQCGTPAYVAPEVLRKKGYDGSKADIWSCGVILYALLAGFLPFQNENLISMYSKVLRAEFQYPRWFSAESRLLISKILVADPERRAAIPAIMRVPWFMKGLSRPFAFQLEEPVLEKADDDKQLQQAELANPKLKPSSPKFFNAFEFISSMSSGFDLSGMFESKRKTRSMFTSKCSATAIVSKIETVAKGLSYKVRNEKGFKIRLQGPSEGRKGKLTVTAEVFEVAPEVAVVEFSKSSGDTMEYAKFCEEDVRPALKDIVWTWQGDSTCEEKQINSDMESTCLDTSLNLNVGPRDAQVITAEDLVQELHRLSSENQKLTERLTHMRENCNLLKKQLSQVMIKNTINNSPERDPPKTNQSKKRKAETDACIDNVISISGNTQCSDEDSSFRRPADKVSRVLVRTQASDTGLYVRDGYQWRKYGQKVTRDNPSPRAYFRCSFAPSCPVKKKVQRSAEDPTVLVATYEGEHNHGRHGSELPSLTSNNQSQSDSGLIMSENGGKSMQLCLVQQMATSLTRDPNFTAALATAISGRILNLASN 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0676 690 SUPERFAMILY Protein kinase-like (PK-like) 9 279 IPR011009 -
Lele03g0676 690 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Lele03g0676 690 Gene3D Transferase(Phosphotransferase) domain 1 115 292 - -
Lele03g0676 690 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 5 409 - -
Lele03g0676 690 Pfam WRKY DNA -binding domain 566 622 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele03g0676 690 Pfam NAF domain 291 348 IPR004041 GO:0007165
Lele03g0676 690 SMART WRKY_cls 564 624 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele03g0676 690 FunFam WRKY transcription factor 40 549 626 - -
Lele03g0676 690 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Lele03g0676 690 MobiDBLite consensus disorder prediction 620 646 - -
Lele03g0676 690 ProSiteProfiles WRKY domain profile. 566 625 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele03g0676 690 CDD CIPK_C 295 409 - -
Lele03g0676 690 MobiDBLite consensus disorder prediction 627 646 - -
Lele03g0676 690 MobiDBLite consensus disorder prediction 495 517 - -
Lele03g0676 690 Gene3D Kinase associated domain 1, KA1 293 414 - -
Lele03g0676 690 Gene3D Phosphorylase Kinase; domain 1 2 91 - -
Lele03g0676 690 FunFam Non-specific serine/threonine protein kinase 289 413 - -
Lele03g0676 690 ProSiteProfiles Protein kinase domain profile. 12 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g0676 690 Pfam Protein kinase domain 12 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g0676 690 SUPERFAMILY WRKY DNA-binding domain 562 624 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele03g0676 690 ProSiteProfiles NAF domain profile. 289 314 IPR018451 GO:0007165
Lele03g0676 690 Coils Coil 453 487 - -
Lele03g0676 690 Gene3D WRKY domain 548 624 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele03g0676 690 FunFam Maternal embryonic leucine zipper kinase 2 282 - -
Lele03g0676 690 SMART serkin_6 12 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0676 Lele-ChrLele03 4005715 4013557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0676 1 419 CBL-interacting serine-threonine protein kinases AT5G25110 65.068 0.0 594
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele03g0676 Pkinase 1e-54 CL0016
TF WRKY Lele03g0676 Pkinase 1e-54 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g0672 28 4312294 4320021 Lele03g0676 03 4005715 4013557 CCT
Lele25g0682 25 4316513 4317644 Lele03g0676 03 4005715 4013557 CCT
Lele26g0687 26 4397674 4398963 Lele03g0676 03 4005715 4013557 CCT
Lele27g1409 27 20371672 20373155 Lele03g0676 03 4005715 4013557 CCT
Lele01g0681 01 4007951 4010680 Lele03g0676 03 4005715 4013557 hybridization
Lele02g0669 02 4022882 4025389 Lele03g0676 03 4005715 4013557 hybridization