Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0661 ATGGTCATCTTGTTGCGTGCTTTACAGACCGAGAAGGCTTTCTTGAAGCAACCTAAAGTGTTCCTCTGTTCGAAGAAATCCGGAAAGGGTAAGAGGCCCGGAAAAGGAGGGAACAGATTCTGGAAAAGCATTGGGTTGGGTTTCAAGACTCCAAGAGAAGCTATTGAAGGGACGTACATTGATAAAAAATGCCCATTCACTGGTACTGTGTCCATCCGGGGCCGCATTCTTGCTGGTACCTGCCATAGTGCCAAGATGACAAGGACTATCACTGTTCGCCGCAACTACCTTCATTTTGTGAAAAAATACCAAAGGTATGAAAAAAGACATTCAAACATTGCAGCACATATATCACCATGTTTCCGTGTGAAGGAGGGAGACCATGTTATCACTGGGCAATGCAGAAATGCATTGTTTGCTGTTGCTCGTTTCTCCGGTTTTGATATTATTTTTTCCCCTCATGACAGGCCTCTTTCAAAGACTGTAAGGTTTAATGTGCTGAAAGTGATTCCAGCTGGGTCTTCTGGAGTTCGGTCTCTTGATCTACAATGCCAACGTGAAGCAACTGGTGGACGTGCTCAGGTGGCGGAGGTGGAGGCAGCCAAGGCCGTCGCCCTGAAGGAAGCCCAGATGCAGAAGGAGGTGGAGACCATGAACGCCTTGACCAGGACCGAGAAGCTTAAAGCCGAGATCCCCTCCAAAGCAAGCGTTGAGTACGAAACCAAGAAACAAAAAGCTGCAGAAGCTATCCTTTTCGACAAAGAGAAAGAAGCAGAGGCACAGAAAGCGTTGGGGGAGGCGTCTCATTTCGCTCGAAAGCAAGCGGCAGATGCAGAATTATACGCAAAGGTCAAGGAGGCAGAGGGAATTGTGGCGCTGGGGCAAGCCCAAGGGAGAGATGGCCAGATCAACGGCGAAGCAGTTCGTGTGCTTCAGCCCAAGATCAGTATTTGGGCCAACAGGGCTGAGGCGGAAGGCGACCACGGCCACCACGATGGCGCTGCTGCCATGAAGGAGGTTGCGGCGTTTGGCCGACGGCTGAGGCGAATGCCTGAGCCTGGAGGCGAAACCCCTGAAGGGGAAGTCCTCTGCCTCTATGCGGCTATCATCCTCGAAATTGAGGGCGTAACTGGCAGGGTCGTAGCTGAAGTCCGAAGATTGGGCGGGACGGTTGTGCTTCCACCCGATCCTGGACAAGAGGTAGCGACTCCTCCCACGGTGGTGGTCGGCGAAGTCGCAGGAGGAGGATTTCTTAATCCAGGAGAAAGAAGAGGAGGGCGAGCAAGGCGTGGTCGGGGACTTGGGCGCATGCAGGGTATTGTAGGAGGATTGGGAAGGGGCATGGGATCGATGGTCGCCGGAGAAGCAGAGGAAAGAAGATTTCAATCTGTGCCTGAGGGAGGATTCGGTAGGCATGATGGAGCAGATAGGTGGAAATGA 1440 0.5229 MVILLRALQTEKAFLKQPKVFLCSKKSGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMTRTITVRRNYLHFVKKYQRYEKRHSNIAAHISPCFRVKEGDHVITGQCRNALFAVARFSGFDIIFSPHDRPLSKTVRFNVLKVIPAGSSGVRSLDLQCQREATGGRAQVAEVEAAKAVALKEAQMQKEVETMNALTRTEKLKAEIPSKASVEYETKKQKAAEAILFDKEKEAEAQKALGEASHFARKQAADAELYAKVKEAEGIVALGQAQGRDGQINGEAVRVLQPKISIWANRAEAEGDHGHHDGAAAMKEVAAFGRRLRRMPEPGGETPEGEVLCLYAAIILEIEGVTGRVVAEVRRLGGTVVLPPDPGQEVATPPTVVVGEVAGGGFLNPGERRGGRARRGRGLGRMQGIVGGLGRGMGSMVAGEAEERRFQSVPEGGFGRHDGADRWK 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0661 479 Pfam Ribosomal_S17 N-terminal 9 77 IPR032440 -
Lele03g0661 479 FunFam 40S ribosomal protein S11 5 152 - -
Lele03g0661 479 MobiDBLite consensus disorder prediction 459 479 - -
Lele03g0661 479 PANTHER 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER 15 136 IPR000266 GO:0003735|GO:0005840|GO:0006412
Lele03g0661 479 SUPERFAMILY Nucleic acid-binding proteins 73 174 IPR012340 -
Lele03g0661 479 Pfam Ribosomal protein S17 79 135 IPR000266 GO:0003735|GO:0005840|GO:0006412
Lele03g0661 479 Gene3D - 3 145 - -
Lele03g0661 479 MobiDBLite consensus disorder prediction 458 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0661 Lele-ChrLele03 3868971 3876094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0661 7 176 Cytoplasmic Ribosomal Protein Gene Family AT5G23740 79.412 2.13e-82 250