Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0657 ATGGGGAAGCCGCCCGCCGGGAAGAAGAAGGATCTCTCAGATCGCAAGGCTGCAAATGCAACCAGCAGGAGCAGCAGGCTCTCTGAGAGAACCAGCAAAGCTATTGTTGATGAAGACACGACCATGTTCGTCAACATGTCTCATGAGCTCAAGGAAGAAGGTAACAAACTCTCTCAAAAGAAGGATCACGAAGGCGCTATATTGAAATATGAGAAGGCCCTCAAGCTCCTTCCGAAAAACCACAGAGAAATTGCACTCCTACGAAACAGTATGGCTTGGTGTTATATGCAAATGGGTCTTGGCGAATACCCAAAAGCAATCAATGAATGTAACTTAGCCCTAGAAGTATCACCCAGATACAGCAAGGCTCTGGTGAGACGAGCAAAGTGCTATGAAGAATTGAACCGTTTGGATTTGGCTTTGAGAGATGTTCATATTGTTTTGAGTTGGGAACCCAATAACCTTCATGCATTGGAGATCCTGGAGAGTTTGAAAACGATAATGGAGGAGAAGGGCATCACCGTTGATGAACAAAAGATTGGTTTGATTAGTCCCGGTGCTCGCTTGCGTAACGTGGTCAGAGAGAAACTAAAGAAGAAGAAAGGCAAAAAGAGAGAGACAGACAAGGCAGAGGATAAGGTTGTTGTTGAGGAGAATCTGAACGCTGCAAAAACTGAACAAGTGGTGACAAAAACAATTGATCAGGAAAAACTGATTGTGGAACCTCTTAAGGAAGAAACAAAGGTAACGAGGACGGCCAAGTTGGTATTTGGAGAGGATATAAGGTGGGCACAGTTACCTGTGAATTGTAGTCTGAAATTGGTAAGAGATATTATTAGGGATCGTTTCCCAGGCTTGAAAGGTGTTCTTGTGAAATATAAAGATCCAGATGGTGACTTGGTCACAATCACCACCACTGAGGAACTAAGGTTAGCTGAATCTTCAGGTCGCGTGCTGGGCTCGGTTCGACTCCATATCACAGAAGTTGATCCAAGCCAGGAACCATCTTATGAAGAAACAACCAGTGAACAAAAACAGGCGCGAACGGATGATGATGCTATCAAGCAAAATGGTCCTACGGAAGAAGAAGGGAAAGATATTGCAACAAAAAGGACGACCACTGTGGAGGAGTGGATTGTTCAATTTGCAAGGCTGTTTAAGAACCATGTTGGGTTTGATTCTGATGTATATTTGGATCTTCATGAGATAGGAATGACGCTGTATACAGAAGCAATGGAGGACACAGTAACAAGCGATCAAGCTCAAGAACTTTTTGATATTTCTGTAGATAAATTTCAGGAGATGGCAGCTTTAGCAATGTTTAACTGGGGGAATGTTCACATGTCCAAGGCGAGGAAGCGACCTTCCATTTCAGACGACGCGTCAAGAGAATCTTCTTTGGAGAATATTAAAGTTGCATACGTGTGGGCACAGAAGCAGTACAAGCTCGCGGAAAGGAGATACGAAGAAGCAGTGAAAATCAAGCCAGACTTCTATGAAGGTTTTCTCGCTTTAGGGCATCAACAATTTGAACAGGCAAAGCTGTGCTGGTTCTATGCAATCGCAAGCAAGGAGGATCTTGAATCAGGGTCTTCTTCTGATGAGGTTTTACAACTCTATAACAAAGCAGAGGACAGCATGGAGAAAGGCATGTTGATGTGGGAGGAGATGGAGGAACAACGCTTGAATGGATTGTCTAAATCAGAAAAATACAAAGCTCAGTTGGAGAAAATGGGTTTGGATAGCATTTTCAAGGATGTTTCTTTTGATGAAGCTACAGAGCACGCTGACAACATGAGATCACAGATAAACCTTTTATGGGGTACTCTGTTGTATGAACGTTCTGTTGTAGAATACAAGTTAGGCCTACCAACATGGGAGGAATGTTTGGAGGTTTCAGTTGAAAAGTTTGAACTCGCTGGAGCTTCTCAAACTGATATTGCTGTCATGATCAAAAATCATTGTTCCAATGTAACAGCACTTGAAGGTTGGGGGTTCAAAATTGATGAGATAGTGCAGGCGTGGAATGAGATGTACGATGCCCAGAGGTGGCAATTTGGAGTTCCATCGTTTCGACTTGAACCGTTGTTTCGTCGGCGAGCCCCGAAACTTCATTACATGTTGGAGCAAATTTGA 2136 0.4345 MGKPPAGKKKDLSDRKAANATSRSSRLSERTSKAIVDEDTTMFVNMSHELKEEGNKLSQKKDHEGAILKYEKALKLLPKNHREIALLRNSMAWCYMQMGLGEYPKAINECNLALEVSPRYSKALVRRAKCYEELNRLDLALRDVHIVLSWEPNNLHALEILESLKTIMEEKGITVDEQKIGLISPGARLRNVVREKLKKKKGKKRETDKAEDKVVVEENLNAAKTEQVVTKTIDQEKLIVEPLKEETKVTRTAKLVFGEDIRWAQLPVNCSLKLVRDIIRDRFPGLKGVLVKYKDPDGDLVTITTTEELRLAESSGRVLGSVRLHITEVDPSQEPSYEETTSEQKQARTDDDAIKQNGPTEEEGKDIATKRTTTVEEWIVQFARLFKNHVGFDSDVYLDLHEIGMTLYTEAMEDTVTSDQAQELFDISVDKFQEMAALAMFNWGNVHMSKARKRPSISDDASRESSLENIKVAYVWAQKQYKLAERRYEEAVKIKPDFYEGFLALGHQQFEQAKLCWFYAIASKEDLESGSSSDEVLQLYNKAEDSMEKGMLMWEEMEEQRLNGLSKSEKYKAQLEKMGLDSIFKDVSFDEATEHADNMRSQINLLWGTLLYERSVVEYKLGLPTWEECLEVSVEKFELAGASQTDIAVMIKNHCSNVTALEGWGFKIDEIVQAWNEMYDAQRWQFGVPSFRLEPLFRRRAPKLHYMLEQI 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0657 711 MobiDBLite consensus disorder prediction 329 367 - -
Lele03g0657 711 ProSiteProfiles PB1 domain profile. 250 329 IPR000270 GO:0005515
Lele03g0657 711 MobiDBLite consensus disorder prediction 1 33 - -
Lele03g0657 711 PANTHER PROTEIN CLMP1 1 709 IPR044517 -
Lele03g0657 711 Gene3D - 237 328 - -
Lele03g0657 711 Gene3D Tetratricopeptide repeat domain 40 182 IPR011990 GO:0005515
Lele03g0657 711 SMART tpr_5 47 80 IPR019734 GO:0005515
Lele03g0657 711 SMART tpr_5 121 154 IPR019734 GO:0005515
Lele03g0657 711 SMART tpr_5 465 498 IPR019734 GO:0005515
Lele03g0657 711 SMART tpr_5 85 120 IPR019734 GO:0005515
Lele03g0657 711 Pfam PB1 domain 251 328 IPR000270 GO:0005515
Lele03g0657 711 SMART PB1_new 250 329 IPR000270 GO:0005515
Lele03g0657 711 MobiDBLite consensus disorder prediction 1 17 - -
Lele03g0657 711 ProSiteProfiles TPR repeat profile. 47 80 IPR019734 GO:0005515
Lele03g0657 711 SUPERFAMILY TPR-like 434 673 IPR011990 GO:0005515
Lele03g0657 711 MobiDBLite consensus disorder prediction 341 367 - -
Lele03g0657 711 SUPERFAMILY CAD & PB1 domains 250 339 - -
Lele03g0657 711 SUPERFAMILY TPR-like 47 514 IPR011990 GO:0005515
Lele03g0657 711 CDD PB1 258 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0657 Lele-ChrLele03 3848887 3851103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0657 37 154 Calmodulin-binding Proteins AT3G25230 32.558 9.48e-07 50.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0649 25 4098684 4100881 Lele03g0657 03 3848887 3851103 CCT
Lele26g0661 26 4200229 4202426 Lele03g0657 03 3848887 3851103 CCT
Lele27g1435 27 20584382 20586579 Lele03g0657 03 3848887 3851103 CCT
Lele03g0657 03 3848887 3851103 Lele25g0635 25 4011376 4014353 CCT
Lele03g0657 03 3848887 3851103 Lele26g0650 26 4125467 4128455 CCT
Lele03g0657 03 3848887 3851103 Lele27g1449 27 20672253 20675231 CCT
Lele03g0657 03 3848887 3851103 Lele28g0633 28 4034251 4037242 CCT
Lele01g0657 01 3840760 3847299 Lele03g0657 03 3848887 3851103 hybridization