Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0639 ATGAAAATTAAGCTTGCTGGGACTAGATTGTATGCAACAGTTGATTTAGATAAAGCCAGAGTTTCAAGAACCAGAATGATACGACACCAAACCTCCAACCCCAATTGGAATGAGACATTTCACATATATTGTGCCCACAAGGTTTCAAACATCGTATTCACTGTCAAAGATGGAAATCCAATTGGAGCAACACTAATTGGAAGAGCTTACGTCCCTGTGGGTCAAGTCCTGAAGGGGGCCCCACTAAACAGACAAGTTGAGATTTATGATGAAGACCTTGGTCCAATACGAGGTGGCTCTAAAATACACGTCAAAATACAATTCGATCATGCGGTCACTGATCCATACTGGTCTAGAGGGATAAAGACTGCAGATTTTGCTGGAGTTCCTCATGTGTTCTTCAAACAGAGAGAAAATTGCAAAGTCAATCTGTACCAAGTTTATGATGCTCCTGATGAAACCGATGAAGGAATGAAAGTTCTTATGCTTGTTTGGGATGACAGAACTTCTGAGGAACTCAGAAAAGAGGGGTTAATGGCAACTCATGATCAAGAAACAGCCCAGTACTTTAGGAATACTAAAGTACAATGTGTTTTGTATCCCAGAAATCCTGATGTTGGAAGGAGCATAATTCAAGGGCTTCAAACTTCAACTATGTTCACTCCCCACCAAAAGGCAGTAGTTGTTGACTGTGACTTATCTGACATTAATCAAGACTCCAATAATTCTTCAAGCTTTCTTTCTCAATTCCCATCTCGGTCAGGAGAATCACAAAGAATCAAGAGCCCGCGAAATGTCGGCGTTCCTCATACTTTCTTTACTCAAAAAGTTGGCTGCAAAGTTACTTTGTACCAAGATGCTCGTGTCCCAAATGGTTATCTTCCTAGGATTCCTTTGTCTGAAGGAAGATATTATGAGCCTAGCAGATGTTGGGAGGACATTTTCAATGCAATCACAAATGCTAGGCACTTGATTTACATAACTGGGTGGCCTGTGTATACTGAAATAACCTTAGTAAGAGACCTAAGGAGGCCAATTTCTGATGGAAACATGACACTTGGGGAACTTCTCAAGAAGAAAGCTGATGAAGGTGTTAATGTTCTCATGCTTGTGTGGGATGATAGAACTTCTGTTACAGAGCTGAAGAAAGATGGGTTGATGGCAACCCATGATGAAGAAACACACGGGTATTTCAAGAACACAAAAGTGAAGTGGGTGTTGTGTCCACGTAACCCAGATGATGGACGTAGCATAATCCAAGGTTTTGAGATTTCAACAATGTTCACTCATTATCAGAAGACAATGGTCGTTGACGGTGAAATTCCTGGTGGAGAATCTCATAGGCGAAGGATTCTAAATTTCCCAGGAGCTTCAATCAATAAAGGAGGCCGAAGAGAGCCATGGCATGATATTCATTGCAGATTAGAAGGACGAGTGGCTTGGGATGTGTTGTTCAACTTTCAACAAAGGTGGGAGAAGCAAGTTGGGAAGCAATTCTTACTCCCAACTAGATTGCTTGATCAGATTCTCGTACCTCAATCTTATCCGACAACATCGAATGACAGAGATTCATGGACTGTTCAGTTGTTCGGATCCATTGATGGTGGTGCAGCTTCTGGCTTCCCTCAAGACCCATCTAAAGCATCTGAATTAGGCGAGCCATCTAAAGCATCTTAAGGCATCCCTGAGAATGGTTCAGTTCGAGCAATATTGGATTGGCAAAGAAGAACAATGGAGATGATGTATACTGAAGCCATTCAGAGAAAAGGAATCAGATCAGCCCACCCTAGAGATTACTTGACATTTTTCTGCCTCAGGAATCGAGAAATTAAGAAAACTGGAGAATATGTTCCTCCAGAGAAGCCAGATCCTGATACTGATTATAGCAGAGCACAAAATGCCAGGCGTTTCATGATCTATGTTCATGCCAAGATGATTACAGATATTGGGTTTAGACGAGCTTTATGGTATGAACATCTTGGAGATCCTGATGAAGGTGATCGAGCCTTTGATCATCCAGAAAGTGAATATTATGTGAAGCTTGTGAATTATCTTTCAGACCAGAACTGGGAAAAATATTCAAATCGAACATTTGATCCACGAAGTTCATTCAACCACCTCATGCGTTACCCTATAGATATAAACAGGGAAGGGAATGTAACAAAACTACAACAGTTTTAA 2181 0.4117 MKIKLAGTRLYATVDLDKARVSRTRMIRHQTSNPNWNETFHIYCAHKVSNIVFTVKDGNPIGATLIGRAYVPVGQVLKGAPLNRQVEIYDEDLGPIRGGSKIHVKIQFDHAVTDPYWSRGIKTADFAGVPHVFFKQRENCKVNLYQVYDAPDETDEGMKVLMLVWDDRTSEELRKEGLMATHDQETAQYFRNTKVQCVLYPRNPDVGRSIIQGLQTSTMFTPHQKAVVVDCDLSDINQDSNNSSSFLSQFPSRSGESQRIKSPRNVGVPHTFFTQKVGCKVTLYQDARVPNGYLPRIPLSEGRYYEPSRCWEDIFNAITNARHLIYITGWPVYTEITLVRDLRRPISDGNMTLGELLKKKADEGVNVLMLVWDDRTSVTELKKDGLMATHDEETHGYFKNTKVKWVLCPRNPDDGRSIIQGFEISTMFTHYQKTMVVDGEIPGGESHRRRILNFPGASINKGGRREPWHDIHCRLEGRVAWDVLFNFQQRWEKQVGKQFLLPTRLLDQILVPQSYPTTSNDRDSWTVQLFGSIDGGAASGFPQDPSKASELGEPSKASXGIPENGSVRAILDWQRRTMEMMYTEAIQRKGIRSAHPRDYLTFFCLRNREIKKTGEYVPPEKPDPDTDYSRAQNARRFMIYVHAKMITDIGFRRALWYEHLGDPDEGDRAFDHPESEYYVKLVNYLSDQNWEKYSNRTFDPRSSFNHLMRYPIDINREGNVTKLQQF 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0639 726 Pfam C2 domain 9 87 IPR000008 -
Lele03g0639 726 MobiDBLite consensus disorder prediction 536 563 - -
Lele03g0639 726 ProSiteProfiles C2 domain profile. 1 86 IPR000008 -
Lele03g0639 726 SMART C2_3c 1 85 IPR000008 -
Lele03g0639 726 SUPERFAMILY Phospholipase D/nuclease 268 502 - -
Lele03g0639 726 CDD C2_plant_PLD 7 108 - -
Lele03g0639 726 Gene3D C2 domain 4 116 IPR035892 -
Lele03g0639 726 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 10 108 IPR035892 -
Lele03g0639 726 Gene3D Endonuclease Chain A 300 519 - -
Lele03g0639 726 PANTHER PHOSPHOLIPASE D 9 151 IPR015679 -
Lele03g0639 726 Pfam Phospholipase D C terminal 668 725 IPR024632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0639 Lele-ChrLele03 3749097 3753592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0639 560 723 Phospholipase D Gene Family (Wang group) AT1G52570 45.755 1.61e-45 172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0623 02 3726860 3732513 Lele03g0639 03 3749097 3753592 hybridization