Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0627 ATGGCTTATTGGCTCCTAATTGGTACTGCAATATTACTACTGTCAAGCCTATTGGTGCAAGAAGAAGCAAGCTCCGTTGTTGGGGACGTTGGCACAGCCAATTCTTACGGACCTCCATACATACCGACTGCTTGTGATGGGAGTAAGAGAGAGCAGTTTCCGCCGGGGAATCTTTTCGTGGCGGTGAGCGAAGGGCTGTGGGATAACGGAGCGGCATGTGGAAGAAGATACAGAATAAGGTGTGTGAGTGGAAACAAAAGGCCCTGCAAATCTGCCAGCGTTGACGTCAAGGTGGTGGATCTCTGCAACAAATCGCCATGTCCAAACACAATTCTCTTGTCCAAAAGTGCTTTTGCTATCATCTCACGCTTCCATAATGCTGACATCAACATTGAATATGTCCAGTTAGTGCTTTCATTTATTTTAATTTAA 432 0.4583 MAYWLLIGTAILLLSSLLVQEEASSVVGDVGTANSYGPPYIPTACDGSKREQFPPGNLFVAVSEGLWDNGAACGRRYRIRCVSGNKRPCKSASVDVKVVDLCNKSPCPNTILLSKSAFAIISRFHNADINIEYVQLVLSFILI 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0627 143 Gene3D - 29 136 IPR036908 -
Lele03g0627 143 Pfam Lytic transglycolase 61 133 IPR009009 -
Lele03g0627 143 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 10 135 - -
Lele03g0627 143 SUPERFAMILY Barwin-like endoglucanases 27 133 IPR036908 -
Lele03g0627 143 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 31 133 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0627 Lele-ChrLele03 3700983 3701612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0627 3 128 Expansin Gene Family AT2G45110 29.710 5.20e-06 42.7