Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0624 ATGCAGGAGCAAGCTACAAGTTCTATTGCTGCAAGCTCTCTGCCTTCGAGCAGTGAAAAATCTTCAAGCTCTGCTCTCCAAGTTGAAGTAAAAGAAGGTATTGAGAGTGACGAGGAGATCAGACGGGTGCCGGAGATCGGCGTTGAGACCGCTGGACCGTCAGCATCTCGTCCAGACTCCGGTTCAGGTGCTGCTACAGGCCGGGTTCAAGGGACAGGGGAGGGTCAAAGGAAAAGAGGGAGAAACTCAGCTGACAAAGAAAGCAAGCGGCTAAAGAGGTTACTGAGGAACAGAGTTTCAGCGCAGCAAGCTAGGGAGAGGAAGAAGGCATACTTGATTGATTTGGAAACTAGGGTTAAAGACTTGGAGAAGAAGAATTCAGAGCTTGAAGAGAGGCTGTCCACTTTACAGAACGAGAATCAGATGCTAAGACATATACTGAAGAACACAACAGCAAGCAGAAGAGGAGGCACTGGTGCTGAGGGAACCATATGGAGACACACTAATCGGCAGCTGGAACAGGAGAGGGAGATAGATGGCGTGTTGAGTGGGCGAAGATTTTCAAGCTCTGCCTGA 576 0.4965 MQEQATSSIAASSLPSSSEKSSSSALQVEVKEGIESDEEIRRVPEIGVETAGPSASRPDSGSGAATGRVQGTGEGQRKRGRNSADKESKRLKRLLRNRVSAQQARERKKAYLIDLETRVKDLEKKNSELEERLSTLQNENQMLRHILKNTTASRRGGTGAEGTIWRHTNRQLEQEREIDGVLSGRRFSSSA 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0624 191 Gene3D Single helix bin 108 149 - -
Lele03g0624 191 FunFam Transcription factor HY5 108 149 - -
Lele03g0624 191 CDD bZIP_HY5-like 90 141 - -
Lele03g0624 191 SMART brlzneu 85 149 IPR004827 GO:0003700|GO:0006355
Lele03g0624 191 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 87 150 IPR004827 GO:0003700|GO:0006355
Lele03g0624 191 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 92 107 IPR004827 GO:0003700|GO:0006355
Lele03g0624 191 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 4 161 IPR044280 GO:0000981|GO:0045944
Lele03g0624 191 MobiDBLite consensus disorder prediction 1 29 - -
Lele03g0624 191 Coils Coil 84 146 - -
Lele03g0624 191 Pfam bZIP transcription factor 86 146 IPR004827 GO:0003700|GO:0006355
Lele03g0624 191 MobiDBLite consensus disorder prediction 1 102 - -
Lele03g0624 191 MobiDBLite consensus disorder prediction 74 102 - -
Lele03g0624 191 SUPERFAMILY Leucine zipper domain 89 147 IPR046347 GO:0003700|GO:0006355
Lele03g0624 191 MobiDBLite consensus disorder prediction 55 69 - -
Lele03g0624 191 MobiDBLite consensus disorder prediction 31 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0624 Lele-ChrLele03 3684917 3690094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0624 1 146 bZIP Transcription Factor Family AT5G11260 76.871 2.33e-57 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele03g0624 bZIP_1 6.9e-14 CL0018