Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0605 ATGGGGATAGATTACTACAATATATTGAAGATTGATAAAAATGCTACAGACGATGATCTGAAGAAGTCATATAGAAAGTTAGCCATGAAATGGCATCCTGACAAGAATCCTAACGACAAAAAAGAAGCTGAAGCCAAATTCAAGCAGATCTCAGAAGCCTATGAGGTACTAAGCGACCCTCAGAAGAGGATGATTTATGATCAGCACGGAGAGGAAGGGTTGAAAGATGTGCCACCGCCAGGGACTGGACCATCAAGTGGGTTTAATCCCAGAAGCGCTGAGGACATTTTTGCAGAATTCTTTGGGAGTAGCCCTGTTGGATTTGGATCATCTGGACCAGGCAAGTCCATGTCGGAAGGACCTGGAATATACGGTGGTTTTGGTCGAGGCGACAACGTTTTTCGTACATACAATGACGGCAAGCAAATGCCAAAAAAGCCACCAGCTGTGGAGAGCAAATTGCCTTGCAGCCTGGAGGAGTTATACTCTGGATCCACAAGGAAAATGAAGATCTCAAGGACTATCGATGCCAATGGACGGCCAATTACAGAAACAGAGATATTAAGCATTGTTGTAAAACCCGGGTGGAAGAAAGGTACCAAGATCACTTTCCCAGATAAAGGGAATCAACAATCAAATCAACTGCCGGCTGACCTTGTGTTTGTGATTGATGAAAAGCCTCATGATTTGTTCACGAGAGATGGGAATGACCTGATTGTGAGCCAAAGGGTGTCACTAGCAGAGGCAATAGGAGGAACAACAGTGAATCTCACCACACTCGATGGACGGAGCCTATCAATACCAGTGACTGACATTGTAAGCCCTGGTTATGAGCTTCTTGTTCCAAAGGAAGGAATGCCAATAACAAAGGAGCCTGGGAATAGGGGTGATTTGAAGATCAGATTTGAAGTTAAGTTCCCTACAAGGTTGACACCAGTGCAACAAGCAGGCCTCAAACGAGCATTGGGGGCTTGA 975 0.4503 MGIDYYNILKIDKNATDDDLKKSYRKLAMKWHPDKNPNDKKEAEAKFKQISEAYEVLSDPQKRMIYDQHGEEGLKDVPPPGTGPSSGFNPRSAEDIFAEFFGSSPVGFGSSGPGKSMSEGPGIYGGFGRGDNVFRTYNDGKQMPKKPPAVESKLPCSLEELYSGSTRKMKISRTIDANGRPITETEILSIVVKPGWKKGTKITFPDKGNQQSNQLPADLVFVIDEKPHDLFTRDGNDLIVSQRVSLAEAIGGTTVNLTTLDGRSLSIPVTDIVSPGYELLVPKEGMPITKEPGNRGDLKIRFEVKFPTRLTPVQQAGLKRALGA 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0605 324 FunFam DnaJ subfamily B member 13 3 111 - -
Lele03g0605 324 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Lele03g0605 324 Gene3D DnaJ domain 3 110 IPR036869 -
Lele03g0605 324 Gene3D - 148 226 - -
Lele03g0605 324 Pfam DnaJ domain 4 67 IPR001623 -
Lele03g0605 324 PRINTS DnaJ domain signature 62 81 IPR001623 -
Lele03g0605 324 PRINTS DnaJ domain signature 6 24 IPR001623 -
Lele03g0605 324 PRINTS DnaJ domain signature 42 62 IPR001623 -
Lele03g0605 324 PRINTS DnaJ domain signature 24 39 IPR001623 -
Lele03g0605 324 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 322 - -
Lele03g0605 324 FunFam Dnaj homolog subfamily b member 145 226 - -
Lele03g0605 324 FunFam DNAJ heat shock family protein 227 322 - -
Lele03g0605 324 Pfam DnaJ C terminal domain 150 307 IPR002939 -
Lele03g0605 324 CDD DnaJ_C 150 310 - -
Lele03g0605 324 Gene3D - 228 308 - -
Lele03g0605 324 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Lele03g0605 324 CDD DnaJ 4 59 IPR001623 -
Lele03g0605 324 SUPERFAMILY HSP40/DnaJ peptide-binding domain 144 239 IPR008971 GO:0006457|GO:0051082
Lele03g0605 324 SUPERFAMILY Chaperone J-domain 3 109 IPR036869 -
Lele03g0605 324 SMART dnaj_3 3 62 IPR001623 -
Lele03g0605 324 SUPERFAMILY HSP40/DnaJ peptide-binding domain 231 315 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0605 Lele-ChrLele03 3560641 3562774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0605 5 114 C2H2 Transcription Factor Family AT1G74250 37.391 2.15e-11 62.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0605 03 3560641 3562774 Lele03g0605 03 3560641 3562774 ECH
Lele01g0603 01 3540421 3542561 Lele03g0605 03 3560641 3562774 hybridization
Lele02g0591 02 3552190 3553284 Lele03g0605 03 3560641 3562774 hybridization