Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0601 ATGGGTCTTGGTCTTTTTTCGTCTGTGTACACAATAAACGGGTCAGATATAAACTTCCGAGAAGCAGGATCGGGGGCTAAACGGGCCAAGCAACAGTTCGAATCGGATGAAGTGCGATCTAATGTTGCAATTCAGTCAGAGTTCAATAGGAGGGCTTTCAAGATTGGATATGGAATACACCAGACGTCTCAGAAGCTCGCTAAGCTAGCGAAGTGTAAAGTGGGCTTTTCTCTCATAGGTGGTGAATGCTGTCTGAAGCAGGAGGATAGGGACCGTCAACCTTTGCTGCAGCAGCAACAGCAGTTTGTTCCATTGCAAGATAGCTACATTCAAAGTAGAGCTGAAGCTCTTCAGAATGTCGAGTCCACTATTCATGAGCTAAGCAACATCTTTAATCAATTGGCCACACTTCTAATGCTTGATTTATATCTTTTGCGCATTCTTCTGATTGTGAAAGAAAGCACAACTACAACTGTCTTTTCATCACCACAATGTGTTCCAAGTGAAGGCAATTTGATGAATAGAAAAGGACCTCCTCCAAGAATCATGGACTTGGATGTGTTTTCAACCCCAAATCTGTATTTTCAAGGCTACATTGGAACCGAGGTTGCTGTTGTAAGAAAGAATAAAGGGTTCTGTTGGGGTGGAAGCAGGAGAGACGAAGGTTCGCTGATGGTTAACAACACGAACGTTTTTGCCGCGCTTGATGCTCTCAAGAAGAAGAAGAAGTCCGATAAGGAGCGCAAGAACAAGGGGTCGTCTAAATCACAGGCTCAGTCGAAGGAACCTGAACCCCAGGTGTTTTGGGCCCCCACTCCCTTAAATGCTAAATCTTGGGCTGATGTTGATGATGACGACGACTATTTTGCGACCACTGAACCGCCTCAGTCTGTCTGGGGTGTATCCGAGCCGGAACAGAGTAAGGAGAAGCCGAGCTACGTAGAGGATAGTGAGAGTGAGGAGGATATCTTAGATGAAGGGGATGATGATGTTGAGGAAGAGCATGATCATGAACCTGAGCTCTCTGTAAATCCTGAGCATGAGGTTAAGAAGCCTGCTGAAGTATCTGTGGCACCAAAGGAGGCAGAACGGCAACTCTCCAAAAAAGAAAGGAAGAAGAAAGAACTTGCAGAGCTTGAGGCTCTTCTGGCTGATTTTGGTGTTACACAGAAAGAGCGTAATGGTCAAGATGAGTCAGGAGGTGCACCCCAGGATAAGAATGAGGCTGATGGAGAAAAGAGAGAAAACTTCACCGCAGAGTCTAGAAGTGCCAAGAAGAAGAAAAAGAAGGATAAAGCATCCAAGGAGGTGAAAGAATCTCAGGATCAGCCCAACGTTGCAGATACAAGCAATGTGGGTGATGATGAGGTTACTGCCACAGAAAATGTGGATGAAGATACGTCCACTGTTGATGTTAAAGAGCGTCTTAAGAAAGTTGCATCCACGAAGAAGAAGAAATCAAGTAAAGAAATGGATGCTGCTGCAAGGGCTGCTGCTCAAGAGGCTGCTGCCAGAAGTGCTAGACTTGCGGCAGCAAAGAAGAAAGAGAAGAATCATTATAACCAGCAGCCTGTGCGGTAA 1581 0.4554 MGLGLFSSVYTINGSDINFREAGSGAKRAKQQFESDEVRSNVAIQSEFNRRAFKIGYGIHQTSQKLAKLAKCKVGFSLIGGECCLKQEDRDRQPLLQQQQQFVPLQDSYIQSRAEALQNVESTIHELSNIFNQLATLLMLDLYLLRILLIVKESTTTTVFSSPQCVPSEGNLMNRKGPPPRIMDLDVFSTPNLYFQGYIGTEVAVVRKNKGFCWGGSRRDEGSLMVNNTNVFAALDALKKKKKSDKERKNKGSSKSQAQSKEPEPQVFWAPTPLNAKSWADVDDDDDYFATTEPPQSVWGVSEPEQSKEKPSYVEDSESEEDILDEGDDDVEEEHDHEPELSVNPEHEVKKPAEVSVAPKEAERQLSKKERKKKELAELEALLADFGVTQKERNGQDESGGAPQDKNEADGEKRENFTAESRSAKKKKKKDKASKEVKESQDQPNVADTSNVGDDEVTATENVDEDTSTVDVKERLKKVASTKKKKSSKEMDAAARAAAQEAAARSARLAAAKKKEKNHYNQQPVR 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0601 526 MobiDBLite consensus disorder prediction 385 526 - -
Lele03g0601 526 MobiDBLite consensus disorder prediction 241 255 - -
Lele03g0601 526 PANTHER EXPRESSED PROTEIN 215 526 - -
Lele03g0601 526 MobiDBLite consensus disorder prediction 403 424 - -
Lele03g0601 526 MobiDBLite consensus disorder prediction 337 372 - -
Lele03g0601 526 SUPERFAMILY t-snare proteins 92 138 IPR010989 GO:0016020|GO:0016192
Lele03g0601 526 MobiDBLite consensus disorder prediction 318 336 - -
Lele03g0601 526 MobiDBLite consensus disorder prediction 443 457 - -
Lele03g0601 526 Gene3D - 84 139 - -
Lele03g0601 526 Coils Coil 362 382 - -
Lele03g0601 526 MobiDBLite consensus disorder prediction 508 526 - -
Lele03g0601 526 MobiDBLite consensus disorder prediction 241 372 - -
Lele03g0601 526 Coils Coil 423 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0601 Lele-ChrLele03 3539251 3547376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0601 102 138 SNARE and Associated Proteins AT3G24350 72.973 7.69e-11 62.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0598 01 3522290 3524491 Lele03g0601 03 3539251 3547376 hybridization
Lele02g0588 02 3528260 3530582 Lele03g0601 03 3539251 3547376 hybridization