Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele03g0584 | ATGCCGGGTTTGACATGTAATGCTTGCAACAAGGAGTTCAACGACGATGCTGAGCGAAAGATTCATTACAAATCCGAGTGGCACAGATACAATCTCAAGCGCAAGGTAGCCGGTGTTCCTGGGGTGACAGAAGCACTGTTCTTGGCTAGACAGTCTGCAGCTGCTCAAGAGAAAGATAAAACTGAAACTCCCATGCTCTATAGTTGTGGCCTTTGTGGAAAAAGTTATAAAAGTTCAAAGGCTCATGCTGAGCATCTCAAATCCCGGGGTCATTTGATGCGGGCATCTGAAGGAAGTAGTTCTTCAGATGACAAGGCAATAGTCAAACCGCAAGCACAACGTGTAGTGAACAGACCTCCTTCCAGAAGAGATGTAGACGATGATGAAAGTGAAGGAAGTGAAGATGAATGGGAGGAGGTCGATCCTGAGGATCCTTTGATTAATTATGCTTCAACGTCCCTGACTGGTTTGAATGTGAATGAGCATGATGATAATGTTGATATGGACGAAGATGATGATGATGATTATGGGGATTTGGATCCATCATGCTGTTTTATGTGTGATCAAAAGCATGATACTATAGAAAGTTGCATTGTTCACCTACACAAGCAGCATGGATTCTTCATTCCAGATGTTGAGTATTTAAAGGATCCAAAAGGCCTGCTCACCTATCTAGGCCTTAAGGTCATGAGGGATTATATGTGTCTTTACTGCAATGATAGATGCCATCCTTTCAGCAGCCTGGAAGCAATTAGGAAACACATGGCCGCCAAAAGTCACTGTAAAGTGCATTATGGTGATGGCGATGATGACGAGGAAGTGGAGTTGGAAGAATTCTATGATTATAGCAGCAGTTATGTGGATGAGCAAGGGAAGCAACTAGTTGCATCAGGTGAAGGAGACAACAATATAGAACTTGGCAGTGGTGGATCGGAGCTCATAATCACCAAGAAATCAAATGATGGAATATCAACCAGAACACTTGGTTCACGTGAATTTTTGCGTTATTATCGTCAAAAACCCCGACCATCACCCACAAATAACATGGCTGTTGCTGCTGCATTGGCTTCAAGGTACAGGAGCATGGGTTTGGCGACAGTGCAATCAAGGGAGTAA | 1116 | 0.4364 | MPGLTCNACNKEFNDDAERKIHYKSEWHRYNLKRKVAGVPGVTEALFLARQSAAAQEKDKTETPMLYSCGLCGKSYKSSKAHAEHLKSRGHLMRASEGSSSSDDKAIVKPQAQRVVNRPPSRRDVDDDESEGSEDEWEEVDPEDPLINYASTSLTGLNVNEHDDNVDMDEDDDDDYGDLDPSCCFMCDQKHDTIESCIVHLHKQHGFFIPDVEYLKDPKGLLTYLGLKVMRDYMCLYCNDRCHPFSSLEAIRKHMAAKSHCKVHYGDGDDDEEVELEEFYDYSSSYVDEQGKQLVASGEGDNNIELGSGGSELIITKKSNDGISTRTLGSREFLRYYRQKPRPSPTNNMAVAAALASRYRSMGLATVQSRE | 371 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele03g0584 | 371 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 69 | 91 | IPR013087 | - | |
| Lele03g0584 | 371 | Pfam | Zinc-finger of C2H2 type | 5 | 28 | - | - | |
| Lele03g0584 | 371 | Pfam | Zinc-finger of C2H2 type | 67 | 91 | - | - | |
| Lele03g0584 | 371 | SMART | c2h2final6 | 182 | 205 | IPR013087 | - | |
| Lele03g0584 | 371 | SMART | c2h2final6 | 4 | 28 | IPR013087 | - | |
| Lele03g0584 | 371 | SMART | c2h2final6 | 233 | 260 | IPR013087 | - | |
| Lele03g0584 | 371 | SMART | c2h2final6 | 67 | 91 | IPR013087 | - | |
| Lele03g0584 | 371 | SUPERFAMILY | beta-beta-alpha zinc fingers | 66 | 96 | IPR036236 | - | |
| Lele03g0584 | 371 | SMART | ZnF_U1_5 | 1 | 35 | IPR003604 | GO:0003676|GO:0008270 | |
| Lele03g0584 | 371 | SUPERFAMILY | beta-beta-alpha zinc fingers | 3 | 36 | IPR036236 | - | |
| Lele03g0584 | 371 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 6 | 28 | IPR013087 | - | |
| Lele03g0584 | 371 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 67 | 96 | IPR013087 | - | |
| Lele03g0584 | 371 | SUPERFAMILY | beta-beta-alpha zinc fingers | 169 | 242 | IPR036236 | - | |
| Lele03g0584 | 371 | MobiDBLite | consensus disorder prediction | 83 | 173 | - | - | |
| Lele03g0584 | 371 | Gene3D | Classic Zinc Finger | 4 | 91 | - | - | |
| Lele03g0584 | 371 | Pfam | C2H2 type zinc-finger (2 copies) | 184 | 285 | IPR041661 | - | |
| Lele03g0584 | 371 | MobiDBLite | consensus disorder prediction | 128 | 143 | - | - | |
| Lele03g0584 | 371 | PANTHER | ZINC FINGER PROTEIN 622 | 2 | 370 | IPR040025 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele03g0584 | Lele-ChrLele03 | 3451094 | 3453123 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele03g0584 | 1 | 371 | C2H2 Transcription Factor Family | AT4G31420 | 64.628 | 2.13e-163 | 461 |
Transcription factors information