Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0577 ATGGATAAATATGCTGGTAAAAGAGCTGTTGATAAGAATATAGTCTCTGGAAAGGGAATGCCTCATGTATTCAGAACTGTTGCTGATACTAAGGATCAAAGTGTCAACTTGTGCAGCCGACCTCATTGCAGTAGCAGGATTCACTCTTCTATAGTTGCTGAGAATAGTTCTTGTAGGAAAGGTAAATCCTTGAGGCCTTCAACCCAATCCTCTTTAAGTGGGAAGGAAGCAGTTGGAAGATCCTGCAGAACTTTCTCGGGAATTAGTAATCCGAGAAAGTCCCTTAAAGAGCCTCGGCAAACAATATCGTCTAGGTTAGAGACAGATTCATCGGAAACTAGCAGCAGCATACATGATGAACCTCCATCTGCAACTTATCAAAGTCAGCTTCAAGCAGAACAAGGACACGCCGAGTCTGATAACGTGATGGTGCAGGAAGTCGCGAGCACCAGAGGTGTTTCAAGAACAAGATCTCAGAGGAATTTTCATCAACCTGGATTACATGGTCAAGAAACTAAAAGCATTGGCTCAGTGACACGTGCTGGTACCAGCCGATATAATTTGAGGAACGTCAAGTGCAACTCAATAAATGATGTCAGCTCCACAGGTTCTTCTTCTTCAGATTCAACCATGAATAGAAGGAAGGATATCGTGAAGGAAAGAAATTGTGGAAGGAAAAGAAGTTCTACTTTCACTGCCAGAGGGAAGAAGTTGAGTGGGTCTTTATTGGAAGGACAAAATTCTGGTTCTGGAAGTGGCATATCTATTTCTGATCCAAGAAGATCAAAAAATATTCCTACTCACCGGGACAACATTGCTTCGGTTAGAACTCGAAGGTCTACAAGTGGTAATGCTAGGGAAAGGCTTCCAAGCCATGGGAATGCACACCCTATTCAGCCCAATGAATCCCCTTTGCCTCATGAACTTGTTTTTCCACATCATGCTTCTGCAGAGTCTACTATAATTCGATTAAGCACCCATAGTAGGCCAGGTTCGAGCGACGGGCAGCCCACATCTCCTGCAGAATTTAACGTTAATTTTCCTATAAGAAGTCGGAGTAGACTACAGCACGAAAACAGTATTGCTGAGGTATTATTAGCACTCGAGAGGATTGGACAAGATGAAGAGCTGACAGAGGAGGAAATTCGTTTACTAGAGATAAATTTCCTCCTTAATGGAACAGACTTGTATGATCAGCATAGAGACATGCGTATGGATATTGATAATATGTCATACGAGGAACTATTAGCCCTGGAAGAAAGGATGGGTACTGTGAGCATAGCTTTAACAGAGGAAGCACTGTCAGAATGCCTTAAGAGAAGCATCTATCAGTCTACACCTTCAGATGACAACGGCGACGACGAGAGTAGCAATATTATTAATGACGATATCAAATGCAGCATCTGCCAGGATGAATATGTGGTTGGAGATGAAGTGGGGAGTCTGCAGTGTGAGCATGGATTTCATGTGGCTTGCATACAACAGTGGCTTCGCCTCAAGAACTGGTGCCCTATCTGCAAAGCATCAGCAGCACCTTCAGATTCATCTGTTGCCTCTAATCAGACTGGATTCTCATGTCCATGTTTCGGTCTCAGTTTCTGTTCTCTTAATGGATTGTTAAAATACACGAATTCTTGTGGCTCTGCACAAATAATTCCACGAAAATCTCAGCGTTTACCCTATGGCCCCTCTGTTTACATTATCACTGCAGAAAGACTGAACCAAACACAAGGCAAGTTGGAGCTCAAGCTCCAGTGTTTTAACCTGGACGAGACAGAACTTTGGGGTCATCTGGTTCATCTTGGCAATGAGAATGCAACTGAGAAGGCTGATGATTACCAATCATTGTCGAGCCATTAG 1860 0.4323 MDKYAGKRAVDKNIVSGKGMPHVFRTVADTKDQSVNLCSRPHCSSRIHSSIVAENSSCRKGKSLRPSTQSSLSGKEAVGRSCRTFSGISNPRKSLKEPRQTISSRLETDSSETSSSIHDEPPSATYQSQLQAEQGHAESDNVMVQEVASTRGVSRTRSQRNFHQPGLHGQETKSIGSVTRAGTSRYNLRNVKCNSINDVSSTGSSSSDSTMNRRKDIVKERNCGRKRSSTFTARGKKLSGSLLEGQNSGSGSGISISDPRRSKNIPTHRDNIASVRTRRSTSGNARERLPSHGNAHPIQPNESPLPHELVFPHHASAESTIIRLSTHSRPGSSDGQPTSPAEFNVNFPIRSRSRLQHENSIAEVLLALERIGQDEELTEEEIRLLEINFLLNGTDLYDQHRDMRMDIDNMSYEELLALEERMGTVSIALTEEALSECLKRSIYQSTPSDDNGDDESSNIINDDIKCSICQDEYVVGDEVGSLQCEHGFHVACIQQWLRLKNWCPICKASAAPSDSSVASNQTGFSCPCFGLSFCSLNGLLKYTNSCGSAQIIPRKSQRLPYGPSVYIITAERLNQTQGKLELKLQCFNLDETELWGHLVHLGNENATEKADDYQSLSSH 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0577 619 MobiDBLite consensus disorder prediction 195 211 - -
Lele03g0577 619 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 450 523 IPR013083 -
Lele03g0577 619 ProSiteProfiles Zinc finger RING-type profile. 466 507 IPR001841 -
Lele03g0577 619 SUPERFAMILY RING/U-box 458 512 - -
Lele03g0577 619 MobiDBLite consensus disorder prediction 60 97 - -
Lele03g0577 619 FunFam E3 ubiquitin-protein ligase arkadia 426 512 - -
Lele03g0577 619 MobiDBLite consensus disorder prediction 262 285 - -
Lele03g0577 619 MobiDBLite consensus disorder prediction 195 305 - -
Lele03g0577 619 MobiDBLite consensus disorder prediction 212 227 - -
Lele03g0577 619 MobiDBLite consensus disorder prediction 233 261 - -
Lele03g0577 619 MobiDBLite consensus disorder prediction 104 183 - -
Lele03g0577 619 Pfam Ring finger domain 465 507 IPR001841 -
Lele03g0577 619 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 74 511 IPR045191 GO:0061630
Lele03g0577 619 SMART ring_2 466 506 IPR001841 -
Lele03g0577 619 MobiDBLite consensus disorder prediction 60 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0577 Lele-ChrLele03 3412728 3416899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0577 361 510 C3H Transcription Factor Family AT2G15530 43.046 6.61e-34 135