Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0569 ATGTTTTTCTACACGTCTTTTCAGTACAGGGAGTCGTCTACTTACATGTCGAAGTATTGTCTTTATCTCATTCATCAGTTGCTCTGCATGTTTTCCTTTTACGTCAATTGTGAACCGGGTTCCTTACTTGGCATCGCTCAATTGTTTTACGATGATGGTAGACAGAAGCTAGAGCTTTCTTTGGAAAGGCCATTGTCAGTATACAAGGTGCACGCACCCGTAAACTCTGAAGGCAAAACTTTGAGTGGTGATAAGAACAGAATAAACCTAAAAATTCCTTCTCTCGGAAAGTTTAAGTTCAGAACAGCTTACGTGTCACCAAGTTCCAGGGTTCTTGGAAGGGGTGAGTTAGTCATGGATCCAAAGTTGATTGCAACGCGGTATTTAAGGTCAAAATTCTTCATAGATCTTGTAGCTACACTACCTCTTCCTCAGATCATGATTTGGTTTATTGTGCCTGCAATTAGAAGCTCTCATGCTGATCAAACCAACAATGCCCTTGTACTGATTGTTCTGCTTCAATATGTTCCCAGATTATATTTGATTTTCCCCTTAAGTTCTCAGATTATCAAAGCCACTGGTGTAGTCACAAAGACAGCTTGGGCTGGAGCAGCATATAACCTTTTACTTTACATGTTGGCTAGCCATGTGTTGGGGGCATCATGGTACTTGTTGTCAATTGAAAGGAATGCTTCATGTTGGAAATCACAATGCAAGAATGAAACTTTCCCCATGAAATGTGTTCTTCAATACTTGGATTGCAACAGTTTAAATGATGATGATCGCATTAAGTGGGTAAAAACTACTTCTGTGTTTGATAACTGCAATCCAAATAATGACATCAGTTTCAAGTACGGCATCTTTGGACCTGCAGTTGAAAACAACGTTGTTTCCTCACAGTTTGCAGAGAAGTATCTCTATTGTCTTTGGTGGGGCTTGCAAAACTTGAGTTCCTATGGCCAGAATCTGAGTACAAGCACATTCATTGGGGAAACTACATTTGCCATACTTATAGCTATCCTGGGTCTAGTTTTGTTTGCCCACTTAATTGGAAACATGCAGCGACGTGATACTGAAGAATGGATGAGACACCGTCAACTGCCACAAAATCTAAGAGAACGTGTTCGAAGATTTGTTCAATACAAGTGGCTTGCAACTCGAGGAGTTGATGAAGAAGCTATCTTGCGAGGCCTTCCCATTGACCTGCGTAGAGACATCCAACGCCACCTTTGCTTAGACCTTGTTCGACGCGTCCCTTTTTTCTCACAAATGGATGATCAGTTACTCGATGCAATATGTGAGAGATTGGTTTCATGCTTGATTACTCAAGGCACTTACATTGTGCGAGAAGGAGATCCAGTGACAGAGATGCTTTTCATCATAAGAGGAAGACTTGAAAGCTCAACTACAAATGGAGGCAGAACAGGTTTCTTCAACTCAATTACATTGAGACCAGGTGATTTCTGTGGAGAAGAGCTTCTAGCATGGGCATTGCTTCCAAAATCCACTTCCAAATTGCCTTCTTCTACAAGAACAGTTAAAGCCCTTGAGGAAGTTGAGACCTTTGCACTAAGAGCTGAGGATCTTAAGTTTGTTGCGAATCAGTTTCGCCGTCTTCACAGCAAGAAGCTGCAACATGCCTTCCGTTTCTACTCTTACCACTGGAGGACATGGGCAGCCTGCTTCATTCAAGCTGCTTGGAGAAGGTACACGAAGAGGAAGCTCGCCGCGAGCCTTAGTTTGAAGGAATGCCACTCATTTGCTTATGAGGAGGGGCAGCCAAGTGCTGTTGTGACTACAAGTGCAAATTCATTAGGTGTGACCATACTTGCCTCAAGATTTGCTGCAACCACAAGGAGAGGAGCTCAGAAGATTAAGGATCTTGAGATGCCTAAGTTGCAGAAGCCTCAAGATCCTGACTTCTCAGTGGAACCAGAGGATGATTAG 1947 0.4263 MFFYTSFQYRESSTYMSKYCLYLIHQLLCMFSFYVNCEPGSLLGIAQLFYDDGRQKLELSLERPLSVYKVHAPVNSEGKTLSGDKNRINLKIPSLGKFKFRTAYVSPSSRVLGRGELVMDPKLIATRYLRSKFFIDLVATLPLPQIMIWFIVPAIRSSHADQTNNALVLIVLLQYVPRLYLIFPLSSQIIKATGVVTKTAWAGAAYNLLLYMLASHVLGASWYLLSIERNASCWKSQCKNETFPMKCVLQYLDCNSLNDDDRIKWVKTTSVFDNCNPNNDISFKYGIFGPAVENNVVSSQFAEKYLYCLWWGLQNLSSYGQNLSTSTFIGETTFAILIAILGLVLFAHLIGNMQRRDTEEWMRHRQLPQNLRERVRRFVQYKWLATRGVDEEAILRGLPIDLRRDIQRHLCLDLVRRVPFFSQMDDQLLDAICERLVSCLITQGTYIVREGDPVTEMLFIIRGRLESSTTNGGRTGFFNSITLRPGDFCGEELLAWALLPKSTSKLPSSTRTVKALEEVETFALRAEDLKFVANQFRRLHSKKLQHAFRFYSYHWRTWAACFIQAAWRRYTKRKLAASLSLKECHSFAYEEGQPSAVVTTSANSLGVTILASRFAATTRRGAQKIKDLEMPKLQKPQDPDFSVEPEDD 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0569 648 SUPERFAMILY cAMP-binding domain-like 355 545 IPR018490 -
Lele03g0569 648 SMART cnmp_10 420 551 IPR000595 -
Lele03g0569 648 Pfam Ion transport protein 99 354 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele03g0569 648 Gene3D - 103 354 - -
Lele03g0569 648 FunFam Cyclic nucleotide-gated ion channel 1 418 536 - -
Lele03g0569 648 MobiDBLite consensus disorder prediction 625 648 - -
Lele03g0569 648 Gene3D Helix hairpin bin 355 410 - -
Lele03g0569 648 Gene3D Jelly Rolls 418 538 IPR014710 -
Lele03g0569 648 ProSiteProfiles cAMP/cGMP binding motif profile. 420 504 IPR000595 -
Lele03g0569 648 SUPERFAMILY Voltage-gated potassium channels 125 355 - -
Lele03g0569 648 Pfam Cyclic nucleotide-binding domain 443 531 IPR000595 -
Lele03g0569 648 CDD CAP_ED 420 551 IPR000595 -
Lele03g0569 648 FunFam Cyclic nucleotide-gated ion channel 1 351 411 - -
Lele03g0569 648 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 98 641 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0569 Lele-ChrLele03 3372430 3376629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0569 99 644 Ion Channels AT2G24610 71.355 0.0 849