Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0559 ATGGATCCAAAGAAATCTAACAAGATCAGAGATATTGTTAGGCTTCAACAGATCCTCAAGAAATGGAGAAAACAAGCCAACTCTTCAAAAACCAGTGGCAGTAACAGCAGCACTAGCAGTAAAAGCATCAAGTTTCTGAAGAGGACACTTTCTATATCTGAACGCCAAGGGGGATCAAGCAATGTTGTTCCAAAAGGCTATCTTGCTGTTTGCGTTGGGGAAGAGATGAAGAGGTTCGTTATACCTACTGAATATCTGAGCCATTATGCATTTCATGTGTTACTGAGAGAAGCAGAAGAAGAATTCGGGTTTCAACAGACTGGTGTTCTGAGAATACCTTGTGAAGTTCCAGTTTTTGAGAGTATCTTGAAGATGGTGCAGGGAAAGAAGGACCAATATAGCACTCAAGAATGCAGACTTAAAGTTGAAGAAATATTGGGACACTGCTCATTAGAACACCAGCTTGCTTATTGTCACCATCCCCAGAGTCCAATCTATCATTCTAAGGCCGCAACTTTGGCATCATGTTATGAAGTTCAGTTCATAACGTCTCCTTATCAGGAACAATTCACATCACCGAACGAATATGATATTTCTTCCTGTACCAAACTAGTGATCGTGCAAGGTCAAACGCCAAGAGCAGAGCATGCACTAGGGTCAGTAACCTTGGGTTCAAATGACTTATACAGAGCTTCACGGAAGTATATTACTACTACAGAAGAGTAG 726 0.4118 MDPKKSNKIRDIVRLQQILKKWRKQANSSKTSGSNSSTSSKSIKFLKRTLSISERQGGSSNVVPKGYLAVCVGEEMKRFVIPTEYLSHYAFHVLLREAEEEFGFQQTGVLRIPCEVPVFESILKMVQGKKDQYSTQECRLKVEEILGHCSLEHQLAYCHHPQSPIYHSKAATLASCYEVQFITSPYQEQFTSPNEYDISSCTKLVIVQGQTPRAEHALGSVTLGSNDLYRASRKYITTTEE 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0559 241 Pfam Auxin responsive protein 17 126 IPR003676 GO:0009733
Lele03g0559 241 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 36 122 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0559 Lele-ChrLele03 3318867 3320028 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0559 1 140 Calmodulin-binding Proteins AT2G24400 61.842 5.98e-56 175
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0559 03 3318867 3320028 Lele03g0559 03 3318867 3320028 ECH
Lele01g0554 01 3292724 3293263 Lele03g0559 03 3318867 3320028 hybridization
Lele02g0549 02 3305272 3305775 Lele03g0559 03 3318867 3320028 hybridization