Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0556 ATGATGGAGACCAAGCCGGCCGCCGTCTTGCCTGCCTCCGCCACCACTCAATCCCAATCTCTCCACGCGTCGTCGGTTCTCTCCGGGATCTGCAACATGAAACGGACGCCGTCCGAGTTGGCCCTGGAAGAGTTCCTGATTAAGACGGTTGCATCAACCAACGACGAGGACGTGAAACCGTACGAGCTTTGGGGTCAAAGAGACAAAAGTTTCCCCCACGCGGACTCATTTCTCGCCGGCGTCGGCTCCGACGATTTCGAACACGCTTTCCGAAACTCGGATGCTGTGACTGCCTTTTCAACTTGTGAGGAACTAACAGATTCCCTTGTATGGCCCCAGAACGCAACTCCCAAGCATTCCCCTCTCTCTGCTACGATTGAATCTCAGTCATCCATTTGTGGTACTGCTGTTTGCAGCCCTGTGTCAGCTAATAATCAACCAACCCTTGGAGATACTCAAGCCAAAGGAACCACCACAAGTGCTTCTTCCTCTCGTGAGCAATCTGATGAGGATGACGTAGCAGGTCCTTGTGATCAGAGCACAAACCCCATTGATATGAAGCGCCTCAGAAGGAAGGTTTCTAATCGGGAATCTGCAAGGAGATCCAGAAGAAGAAAACAAGCACATCTTGCTGATATTGAGTTGCAGGTTGAGCAACTGAGATTGGAGAATGCAGCTCTGTACAAGCAGCTTACAGATGCCAGTCAGCAATTTCGTGAGGCTAATACAAATAACCGAGTGCTAAAATCGGATGTCGAAGCTTTGAGAGCCAAGGTGAAGTTAGCTGAAGATATGGTGACTAGGGGCTCCTTCTCCACCTTAAACAACCCGCTTGTTAAGAATCAGAGTCAGCTACACGTGCCACAACAACTCAACGCCACTAGCCTGCAGCGTCGCATGGCATATGTCTCGCCGACGATCACTGTCCATGGAAGTGATGCCTCATATGCTGCTGTTGCAGTTGATGATCATAATTCATCTCTTGGTCTTGCAAACTTAGATATCAGCAACAGCAATTTCAACACTGGAGTTATTAGTGATGCCATGAGATGTATCAATGAAATATATCGTTGA 1074 0.4898 MMETKPAAVLPASATTQSQSLHASSVLSGICNMKRTPSELALEEFLIKTVASTNDEDVKPYELWGQRDKSFPHADSFLAGVGSDDFEHAFRNSDAVTAFSTCEELTDSLVWPQNATPKHSPLSATIESQSSICGTAVCSPVSANNQPTLGDTQAKGTTTSASSSREQSDEDDVAGPCDQSTNPIDMKRLRRKVSNRESARRSRRRKQAHLADIELQVEQLRLENAALYKQLTDASQQFREANTNNRVLKSDVEALRAKVKLAEDMVTRGSFSTLNNPLVKNQSQLHVPQQLNATSLQRRMAYVSPTITVHGSDASYAAVAVDDHNSSLGLANLDISNSNFNTGVISDAMRCINEIYR 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0556 357 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 190 205 IPR004827 GO:0003700|GO:0006355
Lele03g0556 357 Gene3D - 186 242 - -
Lele03g0556 357 MobiDBLite consensus disorder prediction 143 185 - -
Lele03g0556 357 Pfam bZIP transcription factor 186 236 IPR004827 GO:0003700|GO:0006355
Lele03g0556 357 SMART brlzneu 183 247 IPR004827 GO:0003700|GO:0006355
Lele03g0556 357 Coils Coil 203 265 - -
Lele03g0556 357 MobiDBLite consensus disorder prediction 143 164 - -
Lele03g0556 357 SUPERFAMILY Leucine zipper domain 187 237 IPR046347 GO:0003700|GO:0006355
Lele03g0556 357 FunFam BZIP transcription factor 185 236 - -
Lele03g0556 357 PANTHER BASIC LEUCINE ZIPPER 63 19 339 - -
Lele03g0556 357 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 185 248 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0556 Lele-ChrLele03 3297399 3300535 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0556 101 356 bZIP Transcription Factor Family AT5G24800 44.788 3.99e-55 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele03g0556 bZIP_1 1.3e-09 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0556 03 3297399 3300535 Lele03g0556 03 3297399 3300535 ECH
Lele01g0551 01 3275569 3278697 Lele03g0556 03 3297399 3300535 hybridization
Lele02g0546 02 3289147 3292267 Lele03g0556 03 3297399 3300535 hybridization