Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0536 ATGGCAGTGTCTTCCTCGTATTGCCTACCATTATTGATGGAGCAGAGTGAGACCAATTCTGATTTAGCACCACGGAAACTTGCTCGGCAATTGAATTTCACGGCCAACGGTGGAGATTCAGTGAACGCAGAATTAACGAGGGCCCCTGAATCTCAGACACATTTAGAACTACCACCGCAGACGCAGAAACCGCTGCTGCAGTCGATTTTGCGTCCACAATCACTATCGCCGTCTCAAATACAAATTGAACCGAAGTTGCAGTCGCAGGCATACTCACCGACACAATCGAAGTTACCTTTACGGTCGCAGGGGCAGCAGCCATGGTCATCTCCACACACACAACAACAGCGAGCATCGCAATCTCAGGTCAAGCAACAATCGCAACCGCGGCCGCAGCTAGTTTCACCTGTTTGTCGAATTCCGCACCCTGTGCAGAAAATTTCGATGACGACCTTACAATTATTGAAGCAAGAGTCTCCTAGTAAACGACCTTGGCATAATGTGGAATCAAAAGACAGCACTCCGAAGAAACAAAAGCAGTGCAACTGCAAGAATTCTCGATGCCTCAAATTGTACTGTGAGTGTTTTGCAGCTGGGATCCATTGTGATGGCTGCAACTGTTTAAACTGTCATAATAATGTGGATAATGAGGCGGCCAGACAGGAGGCAGTTGGAATAATTTTAGAGCGCAATCCAAATGCTTTCAGACCAAAAATTGCTAGCAGTCCACAAGAACCACGGGGTTCCAAGGAAGAGGCTGAAATTCAAGTACTGGGAAAGCATAATAAAGGATGTCACTGCAAGAAATCAGGTTGCCTTAAGAAGTATTGCGAGTGTTTCCAAGCCAGCGTCCTCTGCTCTGAAAATTGTAAATGCATGGACTGCAAGAATTTTGAAGGAAGTGAAGAAAGAAGTGCTCTTGATCCAATTAACCTCAAACAGGCAGCTAATGCTGCCATCAGTCAAGCAATTGGGGCCTCTGGCTATGGAATGCACATTACACCCAAGAGAAGAAAACTTGAGGAAATATTATCTGGCAAAGCTGCCATAGATCAAACTGTTTTGACTGCTCAATTTCAACAGGAAAATGATCCAGTGGTTGTGACACCTGCTCCGTCTGGGTTTGTTGCCTCTGACATTGCCAATGTAACAATTCCAGGGTTTTCAAGATCAGCATACAGGTCCCCATTGGCGGATGCCCTCCAGCCACAGGATGTGAAGTATCTCTGTTCACTTTTTGTTGTTCTATCAGGAGTAGCCGCAAAGACATATGCAGAGTCAAGAGGCAGGGTAGAACAGCAAATGGAGATAAAGAAATTTGAAACTTCTGTTGCTTCATCAGCTGAATTACTGCAAGACAATAAAGAAGTCCACAAGCCTGTTTTTGATGATCATGGAAAGAAAAATGGAGCAGAGAGAAGTGGAACTAGTGATTCTGGATCAGATGGAGTTGATATACAGAACTACGGGAGGCCATTGTCACCAGGAACGCTAGCATTGATGTGTGATGAACAGGATGAGATGTTTCTTTCCAATGGTTCTGCCAATGCTGTGGCTTGCAATGATAAAAAAATGATTCATAAGTTCTCATATTCTGATGTTTGCCTGGACATTTATGAAGAGCAGGAACGGCTCGTGCTTACCAGGTTTTGGGATGTTCTCCGTGGACTCATCACTCGTGGAAGCATAAAAGAAGCGATGTGCTCCCCATTAGCCAAGAAAGAGGTGGTAGATAAACTAGAAGCAGCTGATAATGGCAATAATGGAGCTGAAACTGATTTAATAAGTGAGAAGGGGAAGGAAGCTCACATGCAAAGCAATGGCATTGCAAATTCCTACATCCCATTAGCCAATGAATCATCTGAGACAATTAGTGCAATGCCTAATGGACAAGATAATGATGATCTCTCATTGAGAATCGGTCTGCCTACTGGAATTGCTGGCCAGGAAGCTGTGCTGCTAAAGTGCTTGATAACAGAAGGTTTTTTTTTGGCTGATAACGGAAGTTTCTTGAATGTTGCTAATAGCCAGTCAATATTGGAATCATGCTTGAGTGGAAAAGGAAAAAGTCCAGCCACCGTTGCGTCTTCATGCCAAAGCTCATATGGCAATGAGGAAACTATCTGGCTAACAAAGATGAAAATGCTGATAAAGCGGACAACATTATTTGCTTTTATGTTTCCTTCGGGACAAGCCTTTGATGCTCAGAAGCTTCGATCAGATTTCCGGCAAGTCCTCCGAAGCAGGCGAGTCTGCGAAGGAATGCATGCATGGTTTGCTGCATTTGCAGACACCCGTTATGCTGTGGTAGTCCCAATGATTGGTGTTCAGGGGTTTCAATGGGCTATTGACAATGACAAGTGGCAGGCTCGAGTTGATAGTATAAAGCCTGTGTTTGAGGTGGCTTCTGAGGATTTGGGTAAAAGTGCTATTGACAAAGAAGTTGTGAAGAAGGTATGGGACAGGATTGCTCCCGGGCTATCTTCCAAGTTTGACTCACCATACTCAATTCCAGCTATTGCACCACGGCCCTTGCTTATTCTAAATGATGGGAGACACATGCTGGTGCATGTACACATAGATGATGACTTTTTAAGCGGGAGGGTCGTCCATTTTGCCATTTCATTTTTGAAATCATACGGCATGATATTTTATGAGCGATGCGTTAAAGTGGTCACTCATCGCTGCACAGATCGCAAAATGGGAGAAGCCATTGATGTTCAGCAGTTCCGATCAGATTTCCTTCAAGTCCTCTGCGGAAGGCGAGCCTCTGAAGTTCCGCTTCGCGTGGAGCTTGCAAAGCCAGTGGCAAATCCTTTGTATCAGGATAATACTCCACCTTCTGCTGAGATAAGTTTGAAGTCTTCTCAGAAGGAAAACATTGAAAACTTTGAACACTCGCTGAAAGAGGAAAATCTCCATTTGATTACAGAGGAAGGAGAGCAAGGACGCTTGCCAGTACTGATTTTGAGCTTGAAGGAAAACACACATCAAAGAAGGCCAGCCGTTGTTTTCCTACATAGCACAAACAAATGTAAAGAATTCTTACGGCCGTTACTTAAGGTAGCTACTATTCTTATTCTTCTCTGGTTCTCTGTCCTTTCAGTTTTTATAATGGATCAAGAAGATGCTTTCTCTCAGTCTTTAGTTTCGTATTCTGTTCACTTCATGTCTCAGGCATATGCTTCGCGAGGATATATAGCAATTGCCGTTGACTCTCGCTACCATGGTGAACGCGCCAGCAGCACAAATACCTATCGGGATGCTCTTATTTCTGCTTGGAAAACGGGCGAGACAATGCCATTCATATATGACACGGTCTGGGATTTGATAAAATTGGCAGATTATTTAATTCAAAGGGAGGATGTTGACCCTTCTAGAATAGGAATCACTGGAATATCTCTTGGAGGAATGCATGCATGGTTTGCAGCATTTGTAGACACCCGCTATGCTGTGGTAGTCCCAATGATTGGTGTTCAGGGGTTTCGATGGGCCATTGACAATGATAAGTGGCAGGCTCGGGTTGACAGTATAAGGCCTATGTTTGAGGCTGCTCGTGATGATTTGGGGAAGGGTGCCATTGACAAAGAAGTGGTAGAGAAGGTATGGGACAAGATTGCTCCAGGTCTAGCTTCCAAGTTTGACTCACCATACACAATTCCAGCTATGGCACCACGCCCCCTGCTTATTCTAAATGGTGCTGAAGATCCTCGATGTCCCCTCGAAGGTTTGGAAGTTCCGAAGTCAAATGCACAGCTGGCGTATGGAGAATCTCACTGTCTAGACAATTTCAAGCTGATCGCGGAACCTGGAATTGAACACCAAACAACACCATCCATGATGAAGGAAGCATCTGATTGGTTCGATAGGTTTTTAAAAGCTTAG 3885 0.4448 MAVSSSYCLPLLMEQSETNSDLAPRKLARQLNFTANGGDSVNAELTRAPESQTHLELPPQTQKPLLQSILRPQSLSPSQIQIEPKLQSQAYSPTQSKLPLRSQGQQPWSSPHTQQQRASQSQVKQQSQPRPQLVSPVCRIPHPVQKISMTTLQLLKQESPSKRPWHNVESKDSTPKKQKQCNCKNSRCLKLYCECFAAGIHCDGCNCLNCHNNVDNEAARQEAVGIILERNPNAFRPKIASSPQEPRGSKEEAEIQVLGKHNKGCHCKKSGCLKKYCECFQASVLCSENCKCMDCKNFEGSEERSALDPINLKQAANAAISQAIGASGYGMHITPKRRKLEEILSGKAAIDQTVLTAQFQQENDPVVVTPAPSGFVASDIANVTIPGFSRSAYRSPLADALQPQDVKYLCSLFVVLSGVAAKTYAESRGRVEQQMEIKKFETSVASSAELLQDNKEVHKPVFDDHGKKNGAERSGTSDSGSDGVDIQNYGRPLSPGTLALMCDEQDEMFLSNGSANAVACNDKKMIHKFSYSDVCLDIYEEQERLVLTRFWDVLRGLITRGSIKEAMCSPLAKKEVVDKLEAADNGNNGAETDLISEKGKEAHMQSNGIANSYIPLANESSETISAMPNGQDNDDLSLRIGLPTGIAGQEAVLLKCLITEGFFLADNGSFLNVANSQSILESCLSGKGKSPATVASSCQSSYGNEETIWLTKMKMLIKRTTLFAFMFPSGQAFDAQKLRSDFRQVLRSRRVCEGMHAWFAAFADTRYAVVVPMIGVQGFQWAIDNDKWQARVDSIKPVFEVASEDLGKSAIDKEVVKKVWDRIAPGLSSKFDSPYSIPAIAPRPLLILNDGRHMLVHVHIDDDFLSGRVVHFAISFLKSYGMIFYERCVKVVTHRCTDRKMGEAIDVQQFRSDFLQVLCGRRASEVPLRVELAKPVANPLYQDNTPPSAEISLKSSQKENIENFEHSLKEENLHLITEEGEQGRLPVLILSLKENTHQRRPAVVFLHSTNKCKEFLRPLLKVATILILLWFSVLSVFIMDQEDAFSQSLVSYSVHFMSQAYASRGYIAIAVDSRYHGERASSTNTYRDALISAWKTGETMPFIYDTVWDLIKLADYLIQREDVDPSRIGITGISLGGMHAWFAAFVDTRYAVVVPMIGVQGFRWAIDNDKWQARVDSIRPMFEAARDDLGKGAIDKEVVEKVWDKIAPGLASKFDSPYTIPAMAPRPLLILNGAEDPRCPLEGLEVPKSNAQLAYGESHCLDNFKLIAEPGIEHQTTPSMMKEASDWFDRFLKA 1294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0536 1294 MobiDBLite consensus disorder prediction 157 178 - -
Lele03g0536 1294 MobiDBLite consensus disorder prediction 88 133 - -
Lele03g0536 1294 MobiDBLite consensus disorder prediction 458 472 - -
Lele03g0536 1294 Gene3D alpha/beta hydrolase 754 878 IPR029058 -
Lele03g0536 1294 SUPERFAMILY alpha/beta-Hydrolases 1051 1293 IPR029058 -
Lele03g0536 1294 Gene3D alpha/beta hydrolase 923 1293 IPR029058 -
Lele03g0536 1294 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 263 297 IPR005172 -
Lele03g0536 1294 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 178 213 IPR005172 -
Lele03g0536 1294 MobiDBLite consensus disorder prediction 88 137 - -
Lele03g0536 1294 MobiDBLite consensus disorder prediction 162 178 - -
Lele03g0536 1294 ProSiteProfiles CRC domain profile. 177 300 IPR005172 -
Lele03g0536 1294 SMART CXC_2 260 301 IPR033467 -
Lele03g0536 1294 SMART CXC_2 176 216 IPR033467 -
Lele03g0536 1294 MobiDBLite consensus disorder prediction 458 488 - -
Lele03g0536 1294 Pfam Prolyl oligopeptidase family 1056 1161 IPR001375 GO:0006508|GO:0008236
Lele03g0536 1294 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 902 1293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0536 Lele-ChrLele03 3171720 3186353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0536 158 576 CPP Transcription Factor Family AT4G29000 51.701 3.94e-126 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Lele03g0536 Peptidase_S9 1.1e-07 CL0028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0528 01 3146202 3162480 Lele03g0536 03 3171720 3186353 hybridization
Lele02g0517 02 3132235 3136015 Lele03g0536 03 3171720 3186353 hybridization