Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0528 ATGGCTACAGATACCAAAAGCACTGCGGTGAAGGTGAAGTCAAGTGCCCAAGATGGTTCTTCAAAGGGGAAGATCGATTCTTCATCTATCAAGAAGAAGATTGACAGCTCCAGCAAGCACCCACCTGATTCAAAGATGAAATCCGTCACCGTCACGAAATCTGAGGTTAAATCGAAAACGACATCATCTTCATCAAAAACAACAACGAAGAGGGCTACTACCAAAGTGAGAGAGAAGAAAGTCTACAGTTTGCCTGGCCAGAAACATGATCCTCCCGAAGAGAAAGAACCCCTGCGGATATTCTATGAGTCCTTGTCAAAACAGATACCATCAAGTGAAATGGCGGAATTTTGGTTGATGGAACATGGATTGTTGTCTCCTGAACGAGCCAAGAAAGCGTTTGAGAAGAAGCAGAGGAAACAAAAGGAGAATCGGTTGGGAACTCCTTCTAAGCCATCGAAACCATCAAGTAAACCCGAGAGCTCACAGAAACAGCAACGGGCATCAAAGAATGGTGATGTGAAAGCCAAGAAAAGAATTGCCAATGAAAGTGATGACGACGACAATTTCATTTTAAGTTCTAAAAGGAAAAAAGGATACCAGATTGGCTTATCTGAGAGGAATGTTTCTGTTGAAAGATCATCTTTCACTTTCAGACAAAGCAAGTCAAGTAAAATGATATGCGACTGGGCAAAGTCCCACGTTGAAACCCAGAATTCTGAAACAGAGAGCACCTCAAACTCAAGCTCATCCCCATCTTCCCCAAACTCTCCACACTCTCCTCCTTCGGGTCTGCTTCTACAGAACTGTGTTTCGCAAGCTAAAGCTGAGAGCCCAGAATCCAAAAAAGTGAAGAGAATCCGAGACTCCAGCAAGCACCCAGTGTACCGTGGGGTCCGCATGCGAAATTGGGGTAAATGGGTCTCTGAAATTCGCGAGCCTCGCAAGAAATCGCGCATATGGCTAGGTACATTTCCAACGCCGGAAATGGCAGCCAGAGCACATGACGTCGCCGCTCTGAGCATCAAAGGTAGCTCTGCTATTCTCAATTTCCCCGACCTGATCAACCTGCTTCCTCGTCCAACGTCTATCGCTCCTCGAGACGTGCAGGCGGCGGCCGCGAAGGCTGCTCAGATGGATAAGTTCGACTTGCCGACATCATCGTCCTCCTCCCTGTCATCACTGGTTTTAGCAATGGACTTGGGTACCGAGTCGGAGGAACTGAGCGAGATAATAAAGTTGCCAAACTTGGAAACGAGCAACGACGCGGTGGAATTGGGGAAGGAGTTTGTGTACGTGGACTCGGAAGAGGGGTGGATGTACGAGGCACCATGGTTACAGAGCATGGATGATTGTGATGGGTACGTCGCCGATCAGCTGTGGAACTACTAA 1392 0.4749 MATDTKSTAVKVKSSAQDGSSKGKIDSSSIKKKIDSSSKHPPDSKMKSVTVTKSEVKSKTTSSSSKTTTKRATTKVREKKVYSLPGQKHDPPEEKEPLRIFYESLSKQIPSSEMAEFWLMEHGLLSPERAKKAFEKKQRKQKENRLGTPSKPSKPSSKPESSQKQQRASKNGDVKAKKRIANESDDDDNFILSSKRKKGYQIGLSERNVSVERSSFTFRQSKSSKMICDWAKSHVETQNSETESTSNSSSSPSSPNSPHSPPSGLLLQNCVSQAKAESPESKKVKRIRDSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGSSAILNFPDLINLLPRPTSIAPRDVQAAAAKAAQMDKFDLPTSSSSSLSSLVLAMDLGTESEELSEIIKLPNLETSNDAVELGKEFVYVDSEEGWMYEAPWLQSMDDCDGYVADQLWNY 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0528 463 PRINTS Ethylene responsive element binding protein signature 296 307 IPR001471 GO:0003700|GO:0006355
Lele03g0528 463 PRINTS Ethylene responsive element binding protein signature 318 334 IPR001471 GO:0003700|GO:0006355
Lele03g0528 463 MobiDBLite consensus disorder prediction 234 266 - -
Lele03g0528 463 MobiDBLite consensus disorder prediction 25 42 - -
Lele03g0528 463 MobiDBLite consensus disorder prediction 1 96 - -
Lele03g0528 463 CDD AP2 296 354 IPR001471 GO:0003700|GO:0006355
Lele03g0528 463 MobiDBLite consensus disorder prediction 71 96 - -
Lele03g0528 463 MobiDBLite consensus disorder prediction 148 169 - -
Lele03g0528 463 MobiDBLite consensus disorder prediction 272 291 - -
Lele03g0528 463 FunFam Ethylene-responsive transcription factor 2 294 353 - -
Lele03g0528 463 MobiDBLite consensus disorder prediction 1 24 - -
Lele03g0528 463 Pfam AP2 domain 294 344 IPR001471 GO:0003700|GO:0006355
Lele03g0528 463 MobiDBLite consensus disorder prediction 43 70 - -
Lele03g0528 463 SMART rav1_2 295 358 IPR001471 GO:0003700|GO:0006355
Lele03g0528 463 ProSiteProfiles AP2/ERF domain profile. 295 352 IPR001471 GO:0003700|GO:0006355
Lele03g0528 463 MobiDBLite consensus disorder prediction 170 194 - -
Lele03g0528 463 Gene3D AP2/ERF domain 295 353 IPR036955 GO:0003700|GO:0006355
Lele03g0528 463 SUPERFAMILY DNA-binding domain 295 353 IPR016177 GO:0003677
Lele03g0528 463 MobiDBLite consensus disorder prediction 129 206 - -
Lele03g0528 463 PANTHER OS05G0596200 PROTEIN 5 198 - -
Lele03g0528 463 MobiDBLite consensus disorder prediction 129 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0528 Lele-ChrLele03 3116637 3122658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0528 273 455 AP2-EREBP Transcription Factor Family AT5G11590 63.590 2.40e-68 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele03g0528 AP2 7.4e-14 CL0081