Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0518 ATGGCTCTAGACCCAAACAAGGCAAATCAACTGGTAGGGTCTTATACAAAGAGCAGAAAGGATAGTCTTGAAAGAACAATATCTGACATCACGTTGGAACTAAATCAACAAGGCATGGAAGAGGAAGAAGGGGTTGTGGGTGCCTCCATTTGGGAGGTGAAGAATGCGAAGTGCGAGTGTTGTGGAATGTCAGAGGAATGCAGTGAAGAGTACATAAAGGACGTGAGGCACAGGTTCTGGCAAAACTTCATATGTGGTTTGTGTGGTGAAGCAGTGAATGAAACGATGCAGAAGAATGGTGGGAAGGGAAAGGAAGCAGTGGAAGAGCACATGAACGCATGCGTCAAGTTCAATAAGATGGTCAGGTCGTATCCAGTGTTGTACCAGGCTGAGGCCATCAAGCAGATCTTGAAGAAAGCATCGAGAAGCAGATCATCATCAGCCAGGTCTCTGACTCCTTCTGATAACAAAATCAGTGGCACGATCGTCAGGAGTTCCAGCTGTATTCCTGATATCACTCGAGGCACCATCAACAATGTCGCTTCTGGATCCACTAGTAATCATACGTATCACTTTGTGTTTATCCATGGAATAATATCAAAGGCGTGCAGAGATTTGGACCATAATTCAGCACTTTTGGATGGGTTTCATATTAAAAAGGACAAGGGCTTGCGCCATGTGGTGAATAATTTGGTTCTTCTTCCCACTACAATTATGGATTATTGAGTTCATCAAACGTTTCCCAAGTGCCTCACGTTCATGTGCCTCGTCATGCTGGGGTTCAATCTTGGCGCCTCTTCACAATCTTATCATGGAGATCAACAAAAACAAGAACGTCAGCTTCTGTTATCCTTCAAGTCTTCTGCCAAGGATCCACGTCGGTCTCTTTCGAATTGGCTCAATTCTTCAGTCACCTTCTGTAACTGGTACGGCCTCACCTGCGACCACAGCTCTTCTCACGTTAACTCCGTCCAACTCTCAGGTAAAAACATGTCCGGCACTATTTCCTCGTCCATATTTCAACTCCCAAACGTTACAAATATCGACCTCTCCAGCAATCAGTTCGCTGGTGAAATTTCTTTCTCCTTCCCTTCGTCTCTCTCGTCACTTCGTTACCTTAACCTCAGCAACAACAACCTAACTGGCTCGTTGCCTGAGTTTTTATTTTCTGTGTCGTTTTCTCCCCTGGAATCCTTGGATCTTTCAAACAACATGTTTTCCGGGATAATCCCACGTCAGGTTGGTGTTCTTTCTAGTCTGAAATATCTTGATGTCGGAGGGAACGTTCTGGTGGGAGGAATTCCAAGTTCCATCACCAACATCACAGGTTTAGAATACTTGACATTGGCTTCAAACCAGTTAGTGGGTGAAATCCCAAGTGACATAGGTGTAATGAAGAGCTTGAAGTGGATTTACTTGGGTTACAACAACCTCTCCGGCGAAATCCCGACAAGCATAGGGAACTTATTGTCTCTGCATCATCTCGACCTTGTTCACAACGATCTCACGGGATTCATTCCCGAGTCTCTTGGAAACCTCACCAATCTTGAGTTTCTGTTTCTCTACAAAAACAACCTCCTTGGCCCAATCCCACCTTCCGTTTTCGACCTGAAAAAGCTAATTTCGCTTGATCTCAGTGATAATTCTCTCTGGGGAGAGATTTCTGACCTTGTGATTAATCTTCAGAGACTGGAGTTTCTTCAGCTTTTCTCAAACAACTTTACCGGAAAGATTCCGAAGGCTTTAACAGCTTTACCTCGGCTTCAAGTTCTTCAACTGTGGTCCAACCGATTAACGGGAGAGATTCCAAAAGAGCTGGGAATGCATAGCAACCTCACCGTTTTAGACCTTTCCACCAACAACCTTTCCGGAGAGATCCCACAGGGCTTATGTGACAAGAGGAATCTTTTCAAGCTCATTCTTTTCTCCAACTCTCTTGAAGGACAAATCCCTCACAGTTTGAGCTCTTGCACAAGCCTACGCCGAGTACGTCTCCAGAACAACAAGCTTTCCGGCCAATTACCGTCGGAATTCACTAAACTGCCGCAGGTATACTTGTTAGACATGTCCGGTAATAAACTTTCCGGGAGGATAGATGACAGGATGTGGGACATGCCGGCGCTTCAGTTGCTGAATTTGGCTAAAAACAATTTCTCAGGAGAGTTGCCCAACTCTTTCGGGAGTAACCACCTTGAGAACCTGGACTTATCGGAGAACCAGTTTTCAGGTTATATTCCACCTGGTATGGGAAGTTTATGGGAGCTCGTGCAGTTGAAGCTTAGAAGAAACATGCTGTCCGGTAACATCCCAAATGAACTTTGTTCGTGCAAGAAGCTTGTGTCTTTAGACCTCAGTCACAATCAGCTTAGCGGGCAGATACCGATTAGTCTCGGAGAGATGCCAGTTCTAGGGATGCTTGATCTGTCTGAAAACCACTTGTGGGGTGAAATCCCCGAAAATTTAGGAAGCGCCGAATCCCTTGTAGAACTCAACATATCCTATAACCATTTTCACGGGAGGTTACCGGCCACAGGAGCTTTCCTCGCCATCAATAGCAGCGACGTCGCTGGGAACGACCTTTGTGAGAGTGATAGTGACAGTAGAAGCGGTTTGCCACACTGCACCAGAAGAGAAGATAATAAGAATCCATTTTGGTGGTTTTTTCTGTTTGGTCTCGTAGGGTTGCCGCTCGCTGCTTTTCTCCTTGTCTTCATGCGTAGAAGACAGAACTCGGAGGTGACCACAAAGCTTGAAAATGAAGACGGCACATGGGAAATGCGCTACTTTGACTCCAAGACTTTAAAACTCATCACCATCCACGATGTATTGTCTTCCGCAAAAGAAGGAGTACTCATAATCACCAAAGGACGAAAAGAGACAATGCGATACGAGGTGAAAGAGATGAGTGACCTGAATTGTTTTCCGGAAGACACTGGTAAGCTTCGGCATCCAAACATCGTGAAGTTGAAGGGAATATGCAGGTGTTGGAAAGGAGGGTACTTGGTGTATGAATACGTCGACGGAAAATATTTAAGCGACGTCGTTGGGAGTTTAAGCTGGGAAAGACGACGGAATATTTTACTTGGAATTGCAAAAGCACTGAAGTATTTGCATGCTCATGGTTCAGCGTTTGCTTTGGTCGGCGAGATGTCACCCCAGAGAGTTGTGGTGGACGCAAAAGATGTTCCTCGTCTCATGTTGTTCCCTCTCAAGGCTTCCATTCCTTCACCTTACGTTGCTCCTGAATCAAGAAATGCGAAGGAGGTGACGGAGAAGAGTGACATGTACGGACTCGGCGTTATTCTGATAGAATTATTGACGGGAAGAAGTTCGGTGGACGAAGAAGTGGGCATGCAGCACGAGAGCATCGTGGAGTGGGCCCGTTATTGCTATTCGGACTGTCATCTGGATACATGGGTCGACCCGAACATGAAGGGCGGGATTGCATCGTCGGCTCAAAACGACATCGTCGAGGTCTTGAACCTTGCCCTCCAGTGCACAGCCACTGATCCCACAGCTAGGCCGAGCGCAAGCCACGTGTTCAAAACCCTAAATGCTCTGACAACTGCCGCATCGTCCTGTGTTTAA 3588 0.4618 MALDPNKANQLVGSYTKSRKDSLERTISDITLELNQQGMEEEEGVVGASIWEVKNAKCECCGMSEECSEEYIKDVRHRFWQNFICGLCGEAVNETMQKNGGKGKEAVEEHMNACVKFNKMVRSYPVLYQAEAIKQILKKASRSRSSSARSLTPSDNKISGTIVRSSSCIPDITRGTINNVASGSTSNHTYHFVFIHGIISKACRDLDHNSALLDGFHIKKDKGLRHVVNNLVLLPTTIMDYXVHQTFPKCLTFMCLVMLGFNLGASSQSYHGDQQKQERQLLLSFKSSAKDPRRSLSNWLNSSVTFCNWYGLTCDHSSSHVNSVQLSGKNMSGTISSSIFQLPNVTNIDLSSNQFAGEISFSFPSSLSSLRYLNLSNNNLTGSLPEFLFSVSFSPLESLDLSNNMFSGIIPRQVGVLSSLKYLDVGGNVLVGGIPSSITNITGLEYLTLASNQLVGEIPSDIGVMKSLKWIYLGYNNLSGEIPTSIGNLLSLHHLDLVHNDLTGFIPESLGNLTNLEFLFLYKNNLLGPIPPSVFDLKKLISLDLSDNSLWGEISDLVINLQRLEFLQLFSNNFTGKIPKALTALPRLQVLQLWSNRLTGEIPKELGMHSNLTVLDLSTNNLSGEIPQGLCDKRNLFKLILFSNSLEGQIPHSLSSCTSLRRVRLQNNKLSGQLPSEFTKLPQVYLLDMSGNKLSGRIDDRMWDMPALQLLNLAKNNFSGELPNSFGSNHLENLDLSENQFSGYIPPGMGSLWELVQLKLRRNMLSGNIPNELCSCKKLVSLDLSHNQLSGQIPISLGEMPVLGMLDLSENHLWGEIPENLGSAESLVELNISYNHFHGRLPATGAFLAINSSDVAGNDLCESDSDSRSGLPHCTRREDNKNPFWWFFLFGLVGLPLAAFLLVFMRRRQNSEVTTKLENEDGTWEMRYFDSKTLKLITIHDVLSSAKEGVLIITKGRKETMRYEVKEMSDLNCFPEDTGKLRHPNIVKLKGICRCWKGGYLVYEYVDGKYLSDVVGSLSWERRRNILLGIAKALKYLHAHGSAFALVGEMSPQRVVVDAKDVPRLMLFPLKASIPSPYVAPESRNAKEVTEKSDMYGLGVILIELLTGRSSVDEEVGMQHESIVEWARYCYSDCHLDTWVDPNMKGGIASSAQNDIVEVLNLALQCTATDPTARPSASHVFKTLNALTTAASSCV 1195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0518 1195 Gene3D Ribonuclease Inhibitor 275 433 IPR032675 -
Lele03g0518 1195 Gene3D Ribonuclease Inhibitor 727 868 IPR032675 -
Lele03g0518 1195 Gene3D Ribonuclease Inhibitor 434 528 IPR032675 -
Lele03g0518 1195 Gene3D Transferase(Phosphotransferase) domain 1 970 1192 - -
Lele03g0518 1195 ProSiteProfiles Leucine-rich repeat profile. 369 391 IPR001611 GO:0005515
Lele03g0518 1195 PANTHER UNNAMED PRODUCT 420 1113 - -
Lele03g0518 1195 FunFam Leucine-rich receptor-like protein kinase family protein 458 556 - -
Lele03g0518 1195 Pfam Leucine rich repeat N-terminal domain 276 315 IPR013210 -
Lele03g0518 1195 Gene3D Ribonuclease Inhibitor 529 628 IPR032675 -
Lele03g0518 1195 Gene3D Ribonuclease Inhibitor 629 726 IPR032675 -
Lele03g0518 1195 Pfam Leucine rich repeat 396 454 IPR001611 GO:0005515
Lele03g0518 1195 Pfam Leucine rich repeat 467 526 IPR001611 GO:0005515
Lele03g0518 1195 Pfam Leucine rich repeat 659 718 IPR001611 GO:0005515
Lele03g0518 1195 Pfam Leucine rich repeat 586 646 IPR001611 GO:0005515
Lele03g0518 1195 SUPERFAMILY L domain-like 288 623 - -
Lele03g0518 1195 ProSiteProfiles Protein kinase domain profile. 889 1188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g0518 1195 SUPERFAMILY L domain-like 558 886 - -
Lele03g0518 1195 Pfam Leucine Rich repeat 775 791 IPR001611 GO:0005515
Lele03g0518 1195 FunFam Leucine-rich repeat receptor-like protein kinase 275 436 - -
Lele03g0518 1195 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 567 870 - -
Lele03g0518 1195 SUPERFAMILY Protein kinase-like (PK-like) 979 1184 IPR011009 -
Lele03g0518 1195 Pfam Leucine Rich Repeat 369 387 IPR001611 GO:0005515
Lele03g0518 1195 Pfam Protein of unknown function (DUF1677) 53 139 IPR012876 -
Lele03g0518 1195 Pfam Protein kinase domain 980 1182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g0518 1195 SMART LRR_typ_2 489 512 IPR003591 -
Lele03g0518 1195 SMART LRR_typ_2 513 537 IPR003591 -
Lele03g0518 1195 SMART LRR_typ_2 367 391 IPR003591 -
Lele03g0518 1195 SMART LRR_typ_2 705 728 IPR003591 -
Lele03g0518 1195 SMART LRR_typ_2 585 609 IPR003591 -
Lele03g0518 1195 SMART LRR_typ_2 610 633 IPR003591 -
Lele03g0518 1195 SMART LRR_typ_2 800 824 IPR003591 -
Lele03g0518 1195 SMART LRR_typ_2 441 465 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0518 Lele-ChrLele03 3032787 3039775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0518 275 1184 Receptor kinase-like Gene Family AT2G25790 51.130 0.0 858
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Singleton Lele03g0518 Pkinase 2.2e-16 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0510 01 3015757 3018720 Lele03g0518 03 3032787 3039775 hybridization
Lele02g0496 02 2975473 2978435 Lele03g0518 03 3032787 3039775 hybridization