Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0508 ATGTCTTCCCGGCAAATTTCCAAACCACACCAACAAACTGGAACGTCCCAAATGTCCAGAATTCCCCTACTTGTTTTTGCTTTTCGAGTGCATTTCTTCGTCTTCCACAGCTTCTCAGTGACCTCCAGTGCAGATTCGCGAACAGCGGGCTCCGAACAGAGCACCCTACTCAACGTTAAACATCAACTGGACAATCCACCGTCGCTTCGTTCGTGGACCTCATCATCCTCACAGTGCGATTGGCCAGAGATACTTTGCGCCGATGGCGTCGTCACCCAGGTCCTTCTCTCAGGAAAAGGGGTCTCCCGGAAGCTACCGCCAGCGATCTGCGACCTCAAGAATCTGACGAAGCTCGACCTCTCAAACAACAACATCCCCGGGGAATTCCCAAGATTTTTGTACAATTGCTCCAACCTCCAATTCCTTGCCCTCTCTCAAAATTACTTAGCTGGCCCAATCCCCGACGACATTGACAGACTCAAAACTCTGACGTTCTTAGACCTTAATGGCAACTATTTTTCTGGTGATGTCCCGGCGGCCATCGGGAGATTATCAGAGTTACGAACGCTGTACCTCCACAACAACGAATTCAATGGAACTTTTCCCAAGGAAATTGGTAGCTTATCTAAACTCGAAATCCTCGGTTTGGCCTATAATGACAAATTTGTGCCCATGGCGATCCCATCGGGGTTCGGGACCTTGAGGAGTTTGACGTTCATCTGGATGACCAACTGCAATTTAGTAGGTGAAATCCCTGAAAGTTTTCCCAATCTGACGAATCTCGAGCAATTGGATTTGTCATTGAACAATTTGACAGGTAGCATTCCCAGTAGTTTGTTCTCTCTCAAGAATTTACAGTTTCTGTATCTGTACCAGAACAGATTATCTGGTGAAATACCTAGTTCGATCCAGGCCTTGAATTTGATTCAAATTGATCTAGCTATGAACAATTTGACGGGTCCGATTCCTGAAGATTTTGGGAAGCTGGAGAGCTTGACGACCCTTGGCCTTTATTTCAATCAATTGTCTGGTCAGATTCCGAGAAGTTTAGGCCTAATCAAAACGCTCAAGTACTTCAAGATGTTTAGCAATAAGTTGAATGGAACTCTTCCTCCAGAATTAGGCCTATATTCAAAGCTTGAAGTGTTTGAAGTCGCAGACAATCAACTGAGTGGTGCATTGCCCCAATATTTGTGTGCCAAAAATGCTTTGCAATGTGTGATTGCTTTTTCTAACAATCTTGGTGGAAAATTGCCGGAATCGCTTGGAAATTGCACTACACTGCGCACAGTTCAGCTTTGCAGGAACAATTTTTCTGGTGACATTCCTGCAAGTCTTTGGACTTCCAAGAATTTATCAACCTTGATGTTGAGCGATAAATCGTTTTCTGGTCAACTTCCTAGTAAACTACCATGGAATATGTCGAGACTAGATATCAGAAATAACAACTTTTCAGGAGAGACATCGGTTGGAACTTTTTCTGCAGTAAATCTAGTAGTATTTGATGCGAGAAACAATATGCTTTCTGGTGAAATTCCCAAGAACAAATCGTCCTTCAAGTTGCTTTCGTTGATTCTTGTTCTCACCACCTTTGCGTTGCTAGCCACTGCCTCACTGGCCTTCTATAAGTTCAAAGACATCTCAGGAAAGAATTCCAGGCGCAACCTTTCAACATGGAAGCTTACTTCATTCCAGAGGCTAGATTTCTCTCAATGGAATATCTTCTCAAACCTGACAGATGATAACCTCATTGGAAGCGGGGGCTTTGGACAAGTTTATCGGATTCCCTCTAATTGTCCGGGTGAGTATGTTGCTGTAAAATGGATTTGGAATAGCAAAAGTGAGAACTCAAAGCTCCTTGTGTATGAATGCAAGGAAAATCGGGGCCTTGATAGATGGCTTCATGGAAAGAGAAAAGCATCGACTACGCCCAACAATCATCTGGTCTTGAAGTGGCCAACGAGCTTGTCTGCCACAGCGGGATCTTTCGGCTACATACCCCCAGAATATGCCTATTCAACCAAGATCAACGAGAAAGTGGATGTATTTAGCTTCGGGGTGGTACCACATGAGCTTGTAACTGGAAGAGAACCCTATAGCAGAGGAGCAGACAAGCCTAGTAGATTGGGCATGACAGTTCTTCAGCAGTGTTGTCCACCAGATCGTGACGGTAAGAAAATCGGAACTGAGTTTGATATTGCTCCACTTCTTGGCGATACCACGTACATTTCTAATTACAAGGATAGTAGCACAGCTATAGTTGAAAGTGATGAAAGCTAA 2280 0.4425 MSSRQISKPHQQTGTSQMSRIPLLVFAFRVHFFVFHSFSVTSSADSRTAGSEQSTLLNVKHQLDNPPSLRSWTSSSSQCDWPEILCADGVVTQVLLSGKGVSRKLPPAICDLKNLTKLDLSNNNIPGEFPRFLYNCSNLQFLALSQNYLAGPIPDDIDRLKTLTFLDLNGNYFSGDVPAAIGRLSELRTLYLHNNEFNGTFPKEIGSLSKLEILGLAYNDKFVPMAIPSGFGTLRSLTFIWMTNCNLVGEIPESFPNLTNLEQLDLSLNNLTGSIPSSLFSLKNLQFLYLYQNRLSGEIPSSIQALNLIQIDLAMNNLTGPIPEDFGKLESLTTLGLYFNQLSGQIPRSLGLIKTLKYFKMFSNKLNGTLPPELGLYSKLEVFEVADNQLSGALPQYLCAKNALQCVIAFSNNLGGKLPESLGNCTTLRTVQLCRNNFSGDIPASLWTSKNLSTLMLSDKSFSGQLPSKLPWNMSRLDIRNNNFSGETSVGTFSAVNLVVFDARNNMLSGEIPKNKSSFKLLSLILVLTTFALLATASLAFYKFKDISGKNSRRNLSTWKLTSFQRLDFSQWNIFSNLTDDNLIGSGGFGQVYRIPSNCPGEYVAVKWIWNSKSENSKLLVYECKENRGLDRWLHGKRKASTTPNNHLVLKWPTSLSATAGSFGYIPPEYAYSTKINEKVDVFSFGVVPHELVTGREPYSRGADKPSRLGMTVLQQCCPPDRDGKKIGTEFDIAPLLGDTTYISNYKDSSTAIVESDES 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0508 759 Pfam Leucine rich repeat 114 172 IPR001611 GO:0005515
Lele03g0508 759 Pfam Leucine rich repeat 244 295 IPR001611 GO:0005515
Lele03g0508 759 PRINTS Leucine-rich repeat signature 115 128 - -
Lele03g0508 759 PRINTS Leucine-rich repeat signature 258 271 - -
Lele03g0508 759 SUPERFAMILY Protein kinase-like (PK-like) 560 709 IPR011009 -
Lele03g0508 759 Pfam Leucine rich repeat N-terminal domain 51 86 IPR013210 -
Lele03g0508 759 Gene3D Ribonuclease Inhibitor 224 307 IPR032675 -
Lele03g0508 759 Gene3D Ribonuclease Inhibitor 308 404 IPR032675 -
Lele03g0508 759 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 202 299 - -
Lele03g0508 759 ProSiteProfiles Leucine-rich repeat profile. 260 282 IPR001611 GO:0005515
Lele03g0508 759 SUPERFAMILY L domain-like 307 524 - -
Lele03g0508 759 FunFam Highly similar to receptor-like protein kinase 306 472 - -
Lele03g0508 759 Gene3D Ribonuclease Inhibitor 405 586 IPR032675 -
Lele03g0508 759 Gene3D Ribonuclease Inhibitor 49 223 IPR032675 -
Lele03g0508 759 SUPERFAMILY RNI-like 95 367 - -
Lele03g0508 759 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 646 705 - -
Lele03g0508 759 FunFam Receptor-like protein kinase HSL1 isoform A 49 199 - -
Lele03g0508 759 Gene3D Transferase(Phosphotransferase) domain 1 627 731 - -
Lele03g0508 759 ProSitePatterns Protein kinases ATP-binding region signature. 584 607 IPR017441 GO:0005524
Lele03g0508 759 SMART LRR_typ_2 258 282 IPR003591 -
Lele03g0508 759 SMART LRR_typ_2 329 353 IPR003591 -
Lele03g0508 759 SMART LRR_typ_2 112 136 IPR003591 -
Lele03g0508 759 SMART LRR_typ_2 184 208 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0508 Lele-ChrLele03 2981619 2984813 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0508 653 697 Receptor kinase-like Gene Family AT5G25930 71.111 4.72e-14 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele03g0508 LRR_8 4.9e-08 CL0022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0498 01 2958360 2961213 Lele03g0508 03 2981619 2984813 hybridization
Lele02g0484 02 2911960 2915148 Lele03g0508 03 2981619 2984813 hybridization