Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0494 ATGGCAGAAAGGGCACGGCAGAATTTGCATGGCTCTTTTCAGAACTTCTTCGAGGGATGGCTTTCCCGCCAACAGAGCTTCCTCGACCAGCTTCTCACTATCTCCCTTGCTCCAGACTCTCCCCTCAAAATGGAGCAACAGAATGCCCTAATCGACCAAGTCCTCTCTCATTATCTGCAATACTTTCAGGAGAGATCCAGACTCGCGGATCACGATGTCTTCCTCCACTTTTCCCCGGCCTGGTTAACTTCTTACGAGCGAGCTCTCATCTGGATTGCGGACTACAAGCCTTCCCTGGTGCTTCGTCTGGTGGACTGCGCCGTCGGTGATTTATCGCCAGAACAGAAGGTGACGCTGGAGCGAGTCAAGGAAGATACCAGGAGGCAGGAGCGGGTCGTGACGGGGGCAATGGCGAGAGTTCAGGAGATCCTCGGAGGACCGTCGATGCTGCAATTGGCGAGGCGAGTGGGGAGGCTGGTCGATGGGGAAATTGATGAGCTGGACGCTGCCTGGGAAGTGCTGAAGAACGCGATGATAGGGGTAGTGGAGAAAGCCGACGAGCTGCGAGTGTCGACGGCGAGGAAGGTGGTAGAAATTCTGAATCCTTCGCAGACGGTGCAGTTTCTGGCGGCGGCGGCTCAGTTGCAGCTTCGCATAAGGAGTTTCGGAACGCGGTTGGACTCGCGATTCAGAGGGGGTCGAGCTGGTGGCCTGTCCAGGGACCCTTAA 729 0.5638 MAERARQNLHGSFQNFFEGWLSRQQSFLDQLLTISLAPDSPLKMEQQNALIDQVLSHYLQYFQERSRLADHDVFLHFSPAWLTSYERALIWIADYKPSLVLRLVDCAVGDLSPEQKVTLERVKEDTRRQERVVTGAMARVQEILGGPSMLQLARRVGRLVDGEIDELDAAWEVLKNAMIGVVEKADELRVSTARKVVEILNPSQTVQFLAAAAQLQLRIRSFGTRLDSRFRGGRAGGLSRDP 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0494 242 ProSiteProfiles DOG1 domain profile. 10 229 IPR025422 GO:0006351|GO:0043565
Lele03g0494 242 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 12 230 - -
Lele03g0494 242 Pfam Seed dormancy control 45 104 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0494 Lele-ChrLele03 2894792 2895520 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0494 11 231 Calmodulin-binding Proteins AT5G65210 24.775 6.43e-17 77.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0486 01 2880365 2881322 Lele03g0494 03 2894792 2895520 hybridization