Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0456 ATGGAAGCCGAGCGGCTGCTTGGGGTCGCCGAAAAGCTGTTACATAACCGGGATCTCAACGGCTCAAGGGAGTTTGCCATTTTAGCTCAAGAAGCCGAACCGCTTTTGGAAGGTTCCGATCAGATCTTAGCCGTCATCGACGTGCTTCTCGCGGCGGATAAACGCGTTAACAATCACCACGACTGGTACACCATTCTTCAGGTGGATCGTCGATCCAACGACTTCGATCTCATCAAGAAACAGTATCGTCGGCTCGCGCTTCTCCTTCACCCTGACAAGAACAGTTTCTCTCTAGCCGATCATGCTTTCAGGCTTGTTGCCGAGGCATGGGCCGTGCTATCGGACCAGGCTAAGAAGGCAAACTTCGACAAGGAGCTCAGCTTCTTTACCAGGGTTGACTTGAGTATGCCTAGCTGGGTTCAGCAAGACAGATTGACGGTTCGTAGGGGTGGGCCTGGGCCCAGTGAGCGGAATCAAGCGGACGGTGGCAGCGCCGCGAGGGAGGGAGAAGCGGATGAGAACCCACGGCGGAGGCCGACCTTCTGGACGACATGCCCGTACTGTTACTATATATACGAGTACCCTAAGATTTACGAGAATTGTTGTTTGAGGTGCCAGAATTGCGAGAAGTCTTTCCATGGCGTTTCGATTCCATCTTTGCCTTCTTTTGTGCCGGGACAAGAGGCTTATCATTGTTGTTGGGGTTTCTTTCCGATGGGATTCTTTGTCGGAAATACGGTTGGTAAGTCGAGTGTGCCATCCACTCTCAGTTCGCCGCCACTGGTCTCAACTGCGCCGGCAGAGAATGGCATGCATAACGGGCTACCACCGGTGTCCCCATGCTCTGCGGCTTCCAGGGGGGCGACGTCGGTCGTCTCGAATGGGACTGCTCCAGGGTTGGGTAATGTTAAGCGGAAGCGAGGAAGGCCTCGGAAAAATCCTTCGCCGGCATGA 954 0.543 MEAERLLGVAEKLLHNRDLNGSREFAILAQEAEPLLEGSDQILAVIDVLLAADKRVNNHHDWYTILQVDRRSNDFDLIKKQYRRLALLLHPDKNSFSLADHAFRLVAEAWAVLSDQAKKANFDKELSFFTRVDLSMPSWVQQDRLTVRRGGPGPSERNQADGGSAAREGEADENPRRRPTFWTTCPYCYYIYEYPKIYENCCLRCQNCEKSFHGVSIPSLPSFVPGQEAYHCCWGFFPMGFFVGNTVGKSSVPSTLSSPPLVSTAPAENGMHNGLPPVSPCSAASRGATSVVSNGTAPGLGNVKRKRGRPRKNPSPA 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0456 317 MobiDBLite consensus disorder prediction 145 175 - -
Lele03g0456 317 Gene3D DnaJ domain 50 134 IPR036869 -
Lele03g0456 317 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 2 281 - -
Lele03g0456 317 Pfam DnaJ domain 61 123 IPR001623 -
Lele03g0456 317 SUPERFAMILY Chaperone J-domain 54 127 IPR036869 -
Lele03g0456 317 SMART dnaj_3 60 118 IPR001623 -
Lele03g0456 317 MobiDBLite consensus disorder prediction 280 317 - -
Lele03g0456 317 ProSitePatterns Nt-dnaJ domain signature. 103 122 IPR018253 -
Lele03g0456 317 PRINTS DnaJ domain signature 98 118 IPR001623 -
Lele03g0456 317 PRINTS DnaJ domain signature 63 81 IPR001623 -
Lele03g0456 317 PRINTS DnaJ domain signature 82 97 IPR001623 -
Lele03g0456 317 MobiDBLite consensus disorder prediction 283 297 - -
Lele03g0456 317 ProSiteProfiles dnaJ domain profile. 61 126 IPR001623 -
Lele03g0456 317 CDD DnaJ 61 115 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0456 Lele-ChrLele03 2586493 2587446 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0456 2 314 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 46.726 1.25e-94 283