Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0453 ATGGACGGCGACTATTCATCATTTGTTCCCTCTCAGACGCAGACGTCAAGCCCCGGAGCCACCGTGGAGGTGGCCAAGAGACCCAAGGGCCGCCCTAAAGGCTCCAAGAACAAGCCCAAGGCCGCTCGTCCTCTCGGATTCGTACCCCGCGACGACACGATGGCTCCTTACATTCTTGAAGTCCCTCACGGCAACGACGTCGTTCGGGCTATTTCCCAGTTTAGCGTCCGCAAGAACACCGGCCTCTGCGTCCTTAATGCTTCCGGCACCGTCGCTAACGCCTCCCTCTGTCTCTCCCCCGCCGCTTCCTCTCCTGAAATCACTTGTCCCGGTCATCACGTCATCCTCTCCATGTCCGCCGCATTCGGCCCTCGCCATTGCCCTACTTCGAATTTCTCCCCCAAACCCCTCACCGTCAGCCTCGCAGCCCCAAACGGCCACGTCATCGGAGGGTTTGTGTTTGGCAGTTTGGTCTCGGTGGGCCCGGTCTTCGTGATAGCAACTTCATTCAACCGCCCATCCTATCATAAGTTGTCATATGAAGATGAAGAGAGCGTGCGGAACACGGCCGCCGGAGAAGGAGAAATTATGTACGCGCCGTCTCCTCTGCCTGGTGGGATACCTATGCAAGGGGATCGCCTAACCATCGTTCAAGGGCCTTGGGCTTCAATGATTAGGCCACCACAACCTGCACCCTCGACGCCTCCTCAGTATTTTGCAACTTAG 726 0.5758 MDGDYSSFVPSQTQTSSPGATVEVAKRPKGRPKGSKNKPKAARPLGFVPRDDTMAPYILEVPHGNDVVRAISQFSVRKNTGLCVLNASGTVANASLCLSPAASSPEITCPGHHVILSMSAAFGPRHCPTSNFSPKPLTVSLAAPNGHVIGGFVFGSLVSVGPVFVIATSFNRPSYHKLSYEDEESVRNTAAGEGEIMYAPSPLPGGIPMQGDRLTIVQGPWASMIRPPQPAPSTPPQYFAT 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0453 241 Pfam Plants and Prokaryotes Conserved (PCC) domain 56 171 IPR005175 -
Lele03g0453 241 Gene3D - 55 189 - -
Lele03g0453 241 SUPERFAMILY AF0104/ALDC/Ptd012-like 53 183 - -
Lele03g0453 241 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 18 194 IPR014476 GO:0003680
Lele03g0453 241 MobiDBLite consensus disorder prediction 1 21 - -
Lele03g0453 241 MobiDBLite consensus disorder prediction 1 47 - -
Lele03g0453 241 CDD DUF296 56 170 IPR005175 -
Lele03g0453 241 ProSiteProfiles PPC domain profile profile. 51 193 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0453 Lele-ChrLele03 2568809 2569534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0453 20 206 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 51.531 1.20e-48 159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0453 03 2568809 2569534 Lele03g0453 03 2568809 2569534 ECH