Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0438 ATGGGTCTTCTTTCTTGTGATGCCAAATCTGTAGTCGCCACCTGCCAATGCGATCCACTCCTCTTGGATGTAAACACAGCCTCAAAAGCAAGAAATTATAAGCAGAATAAGAAGCTGCCGGAGATCAGAAAGTTTGATTATTTGGACCTGGTGGCAGCCACGGATGGGTTCTCAGCAGATAGCTTCCTAGGCAAAGGCAGTCACGGCAGCGTCTACAGAGCAACCATCGACGACGGCAAGCTCACCGTTGCCGTCAAAATATCAAAGTTCAAAAGGCCATCCGCCACAAGCCTCCTTAATCACTGCTCCAACTGTACGGGTTGTTCCAAGTGTACCAGCCCCGTAGAGAACGAGATCGAGATTCTCTCCAGAGTCCCAAGCTCTTGCCGCATCGTCAACCTCATCGGCTTCTGTACGGACTCCAACCTCAACAAACTGATCGTCGTCGAGTACATGCCCAACAGTTCCCTCCACAATCTCTTGCACTCCGCGCCCAATCCCCCCGGTTGGCCACGACGTGTCCGGTTAGCATTGCAGGTGGCAGAAGCGGTTCAGATTCTCCACTCTTCCAACCCGCCTGTGATTCACCGGGACATCAAATCTTCAAACGTTTTAATCGACAATGACTGGAACGCGAGACTGGGCGATTTCGGCCTCGCTCTCAGGGGGCACCAATCGGATTTTCTCGGGAAGTACACATTGCCTGCGGGGACTTTAGGATATCTTGACCCATTCTATCTGGCGCCGGGGGATCTAAGTGAGAAGAGCGACGTGTTCAGCTTCGGGATCTTGTTACTGGAGATCATCAGCGGAAGGAACGCAATCGACTTGAAGTACAGCCCACCATCGGTAGTTGAGTGGGCCGTGCCGTTAATAAAGCAGGATGAGTTTGAGGCAATCTGTGACCCGCGGTTAGGTGCGCCGTCAGACCCAACAGTGATAAAACAACTGGCGGTGTTGGCGGCGAAGTGCGTGAGGTCCAGGGCGGAGAAGCGGCCGCCCATGGCGGAGGTGGTGGAGAGTTTAAAACAAGTGAGGAAGAGGATTCATGAGTGGCGAATATGGAGGAGCGTGAAGAGGCGGTTGGGGCGGAGGGAGAAAACAGAGAGGTTGAGTGGGTGGGAAGGGAATAATGAAAGGAGGGAAGAAGTTGCGAGGGTAGTGAAGATGGGAAGCAGAAGAAACTGGAAGGTGTCAAGGGTGGGAGTTGTAGATCATGAGACGAGTGAAGGTGGGAATGATCAAGTGGTGAGGTCGAAATCATTCGGGTGTGACGGTGGGATGAAAATGCAGCTTAATCAAAGTGGAAATGGGCAACTTGGGACGTTGTTTGTGACAATGAAGGGGGGAGTGAGGCTGAAAAAGTCGAGGTCCATTGGAGTTTTGTACAAGCCACGGCTTTTACCTCAGGTGGACAGAGCTTTTCAACGATAA 1434 0.5209 MGLLSCDAKSVVATCQCDPLLLDVNTASKARNYKQNKKLPEIRKFDYLDLVAATDGFSADSFLGKGSHGSVYRATIDDGKLTVAVKISKFKRPSATSLLNHCSNCTGCSKCTSPVENEIEILSRVPSSCRIVNLIGFCTDSNLNKLIVVEYMPNSSLHNLLHSAPNPPGWPRRVRLALQVAEAVQILHSSNPPVIHRDIKSSNVLIDNDWNARLGDFGLALRGHQSDFLGKYTLPAGTLGYLDPFYLAPGDLSEKSDVFSFGILLLEIISGRNAIDLKYSPPSVVEWAVPLIKQDEFEAICDPRLGAPSDPTVIKQLAVLAAKCVRSRAEKRPPMAEVVESLKQVRKRIHEWRIWRSVKRRLGRREKTERLSGWEGNNERREEVARVVKMGSRRNWKVSRVGVVDHETSEGGNDQVVRSKSFGCDGGMKMQLNQSGNGQLGTLFVTMKGGVRLKKSRSIGVLYKPRLLPQVDRAFQR 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0438 477 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Lele03g0438 477 ProSitePatterns Protein kinases ATP-binding region signature. 63 86 IPR017441 GO:0005524
Lele03g0438 477 Gene3D Transferase(Phosphotransferase) domain 1 152 360 - -
Lele03g0438 477 Gene3D Phosphorylase Kinase; domain 1 27 151 - -
Lele03g0438 477 SUPERFAMILY Protein kinase-like (PK-like) 40 352 IPR011009 -
Lele03g0438 477 PANTHER OS01G0253100 PROTEIN 34 351 IPR045271 -
Lele03g0438 477 SMART serkin_6 57 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g0438 477 Pfam Protein tyrosine and serine/threonine kinase 61 342 IPR001245 GO:0004672|GO:0006468
Lele03g0438 477 ProSiteProfiles Protein kinase domain profile. 57 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0438 Lele-ChrLele03 2490707 2492140 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0438 43 349 Receptor kinase-like Gene Family AT3G59420 41.987 4.03e-67 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Lele03g0438 PK_Tyr_Ser-Thr 1.3e-35 CL0016