Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0431 ATGAAGAGTAACACCAAAAGTATCCCCAGACTGTTGAGACTTGACCATGAACATACCCGCGTTACTATGCCTCATGTTTCGGCACAGGCAATGACTCCGCCGCCGCCGCTGGCACCTTCCCAGTTCATGGAGCCACCGACGGTAACCTACGACAACAAGAGCGTGGCCATCATCATGGGCGTCGTGGTCATCGTATTCTTCGTATCAGGCTTCGTTTCGCTGTACAGTCGTCAGTGTGGGCACCGACGCCAATTCCGAGGCCACATCGACCTCACTTTTCCAATGGGGGCCGCGCGATCCACTTCCCGCGCTCAGGGGCGAGGTGTAAGCCCGGAGATCATCCAGAGCTTCCCGACTTTCTTGTACTCGACGGTGAAATGGAGAGGGGCACTTGCATGCGCGGTGTGCCTGAACGAGTACGAAGACGACGAAACTCTGCGGTTAATCCCGAGATGCAACCACGTGTTCCATCCGGAATGCATCGAGAGCTGGCTGGCGTCTCACTACACTTGCCCACTGTGCCGAGCCAACCTGCTGGTTCCAGTAGCAGCACAGGTTCAGAGCGAGGCCACGCCTCTGATAGCCCTAGAAATTCCAGTTTCATCACAAGAAGAAGAAGAAGAAGAGAATGATAATGTAGGAGGAAGGGGGAATATAAGAGTGAATCGGAGCAGGACGGTGAAGGAGCCGAGGGGTCCAAGTCGGTCAAGGTCAACGGGATTGCTGATGGGGATACTGTTCGGGAGGTCTCGATCAACGGGAGATGGCTACAGGAGGGAGAACTGGGAGAGATACACGCTGAGGTTGGAGGAAGTGAAGAGAGGGACGAGGCTGAAACGGACCAAAAGTTGCGTAGCGTTTACGAGAATGAGCAGTGGCCGGAGAGGGTATCGAACAAGAAGCGTTGGCAGCAACTACTCGCAGTTACGATACGACTACGACCACTTCATCACATCCCATGCATTCCCCATCAAGCCGCCCCCTTCTTCATAA 993 0.5468 MKSNTKSIPRLLRLDHEHTRVTMPHVSAQAMTPPPPLAPSQFMEPPTVTYDNKSVAIIMGVVVIVFFVSGFVSLYSRQCGHRRQFRGHIDLTFPMGAARSTSRAQGRGVSPEIIQSFPTFLYSTVKWRGALACAVCLNEYEDDETLRLIPRCNHVFHPECIESWLASHYTCPLCRANLLVPVAAQVQSEATPLIALEIPVSSQEEEEEENDNVGGRGNIRVNRSRTVKEPRGPSRSRSTGLLMGILFGRSRSTGDGYRRENWERYTLRLEEVKRGTRLKRTKSCVAFTRMSSGRRGYRTRSVGSNYSQLRYDYDHFITSHAFPIKPPPSS 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0431 330 SUPERFAMILY RING/U-box 111 181 - -
Lele03g0431 330 CDD RING-H2_EL5_like 133 175 - -
Lele03g0431 330 PANTHER RING FINGER DOMAIN-CONTAINING 39 187 - -
Lele03g0431 330 ProSiteProfiles Zinc finger RING-type profile. 133 175 IPR001841 -
Lele03g0431 330 SMART ring_2 133 174 IPR001841 -
Lele03g0431 330 FunFam E3 ubiquitin-protein ligase ATL6 97 181 - -
Lele03g0431 330 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 96 180 IPR013083 -
Lele03g0431 330 Pfam Ring finger domain 132 175 IPR001841 -
Lele03g0431 330 MobiDBLite consensus disorder prediction 202 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0431 Lele-ChrLele03 2450608 2451600 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0431 54 296 Rapid Response to Elicitors AT3G05200 37.692 3.64e-41 146