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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Lele03g0430
ATGGCGCTAGAGGCTGTAGTTTTCTCGCAGGATCCCTTCTCGTATAGTTGCTGCAAGGACTCGTACTCCTTTGCCGCAGCTTGGAACCCCGACGACCATGGCTTTCATGAAGAAGAAGAGAAAGCCGCCGTCGGAGTACTCATCAACAGTCACATAGAACCCAGACGTGTCCATGCAACTTGGGATTCTAACTCTTCTCCTGAGGCCTGCACCGCTCGCCGATCGCTGATCTCCCCTGCTCCCTTGGGTCGGCGTAAACGACGTCGCACGAAGAGCGCCAAGAACAGGGAGGACATGGAGAACCAGAGGATGACTCACATTGCGGTGGAGCGCAATCGACGGAGACAGATGAATGACTACCTGGCGGTGCTCCGTTCCCTGATGCCTCCATCTTACGTTCAAAGGGGGGACCAGGCGTCTATAATAGGAGGCGCCATTAACTTTGTGAAGGAGCTAGAACAGCTATTGCAGTCAATGGAGGGACGAAAGAAGAAGACGAAGCAACAAGATCAGGAGTGTGGGACGTGTAGCTCGCCCTTTGCCGAGTTCTTCACGTTCCCGCAGTACTCCACCCATGCAAATCACGGCAATACCAGTTCCCAGCAATGGGCCGTCGCTGACATTGAAGTCACCATGGTCGACACCCACGCCAACCTCAAGATACTCTCCAAGAAACGCTCCAACCAGCTCACCAAGATGGTCGTTGGCCTTCAAGCTCTCAGGCTCACCGTTCTCCACCTCAACGTGAGCACCCACGACGACACGGTCTTCTACTCTGCTAGCGTCAAGCTTGAAGATGGGTGTGAGCTGAATACGGTGGATGAAATCGCTGCTGCTGTGAATCAACTGTTGAGCAGAATCCAGGAGGAGTCGCCTTTCTGCTAA
885
0.5401
MALEAVVFSQDPFSYSCCKDSYSFAAAWNPDDHGFHEEEEKAAVGVLINSHIEPRRVHATWDSNSSPEACTARRSLISPAPLGRRKRRRTKSAKNREDMENQRMTHIAVERNRRRQMNDYLAVLRSLMPPSYVQRGDQASIIGGAINFVKELEQLLQSMEGRKKKTKQQDQECGTCSSPFAEFFTFPQYSTHANHGNTSSQQWAVADIEVTMVDTHANLKILSKKRSNQLTKMVVGLQALRLTVLHLNVSTHDDTVFYSASVKLEDGCELNTVDEIAAAVNQLLSRIQEESPFC
294
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Lele03g0430
294
CDD
bHLH_AtFAMA_like
104
173
-
-
Lele03g0430
294
SMART
finulus
107
158
IPR011598
GO:0046983
Lele03g0430
294
ProSiteProfiles
Myc-type, basic helix-loop-helix (bHLH) domain profile.
101
152
IPR011598
GO:0046983
Lele03g0430
294
Coils
Coil
149
169
-
-
Lele03g0430
294
Gene3D
-
90
170
IPR036638
GO:0046983
Lele03g0430
294
MobiDBLite
consensus disorder prediction
60
100
-
-
Lele03g0430
294
Pfam
Helix-loop-helix DNA-binding domain
102
153
IPR011598
GO:0046983
Lele03g0430
294
PANTHER
MAX DIMERIZATION, MAD
72
290
-
-
Lele03g0430
294
SUPERFAMILY
HLH, helix-loop-helix DNA-binding domain
100
173
IPR036638
GO:0046983
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Lele03g0430
Lele-ChrLele03
2438079
2439276
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Lele03g0430
1
264
Basic Helix-Loop-Helix Transcription Factor Gene Family
AT1G72210
49.169
1.05e-76
234
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
bHLH
Lele03g0430
HLH
3.3e-10
No_clan
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Lele03g0430
03
2438079
2439276
Lele03g0430
03
2438079
2439276
ECH
Lele01g0417
01
2434873
2436067
Lele03g0430
03
2438079
2439276
hybridization
Lele02g0412
02
2392493
2398829
Lele03g0430
03
2438079
2439276
hybridization
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