Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0425 ATGCGACTAGAATTTTCGACTGGTCGAGTGAAGAAAATCATGAAGCTTGATCCCGAAGGCCAGAGGATAAGTTCAGAAGCCTTGTTCCTGGTATCATGCTCCACCGAGCTCTTCCTCCAATTCCTGGCTAAAACGTTTGCCCAAGTTGCCATCGAGAAGAAGGTAAAGCTTAAACACTTGAGAATCGGCGTCAAGAGACACCAACCAACCAACGCGTTTCTAATAAAGACCTCCATTCACAGTTTTAAACTGAAGACTCCTGATGCTTGTGTCTATTCTGAAAGCATGTATGTTGTCATGCTGAACTACTAA 312 0.4391 MRLEFSTGRVKKIMKLDPEGQRISSEALFLVSCSTELFLQFLAKTFAQVAIEKKVKLKHLRIGVKRHQPTNAFLIKTSIHSFKLKTPDACVYSESMYVVMLNY 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0425 103 Gene3D Histone, subunit A 1 64 IPR009072 GO:0046982
Lele03g0425 103 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 5 55 IPR003958 -
Lele03g0425 103 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 5 77 - -
Lele03g0425 103 SUPERFAMILY Histone-fold 3 80 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0425 Lele-ChrLele03 2422556 2423054 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0425 1 77 CCAAT-HAP5 Transcription Factor Family AT5G43250 58.750 1.12e-24 89.0